Query= MSMg01no484_p20.b1 MSMg01no484_p20.b1 CHROMAT_FILE:
MSMg01no484_p20.b1 PHD_FILE: MSMg01no484_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:45 2005
(669 letters)
>mm_chr18_52699028_52700096
Length = 1069
Score = 1224 bits (633), Expect = 0.0
Identities = 660/669 (98%), Gaps = 1/669 (0%)
Strand = Plus / Plus
Query: 1 ccttaatataattttcaaatttatttgattattttgtgaatgtgtgttggggatgtacat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 ccttaatataattttcaaatttatttgattattttgtgaatgtgtgttgggggtgtacac 260
Query: 61 acacgttgcactgtgtaggtagaggtcagaggccaacttccaggattttgtttttatact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacgttgcactgtgtaggtagaggtcagaggccaacttccaggattttgtttttatact 320
Query: 121 ggctagttttgtgtcaacttgacacaggctggagttatcacatagaaaggagattcagtt 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggctagttttgtgtcaacttgacgcaggctggagttatcacatagaaaggagattcagtt 380
Query: 181 ggggaaatacctctatgagatccagctgtaaggcattttcttaattagtgatcaaggggg 240
|||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 ggggaaatgcctccatgagatccagctgtaaggcattttctcaattagtgatcaaggggg 440
Query: 241 aaagtgtcccttgtgggtggtgccatctctgggctggtagtcttggttctataagagacc 300
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaag-gccccttgtgggtggtgccatctctgggctggtagtcttggttctataagagacc 499
Query: 301 aggctgagcaagccagtggacacaagccagtaaagaacatccctccatggcctctgcatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aggctgagcaagccagtggacacaagccagtaaagaacatccctccatggcctctgcatc 559
Query: 361 agcttctgcttcctaacctgcttgaggtccagtcatgacttcctttggtgatgaacagca 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agctcctgcttcctaacctgcttgaggtccagtcatgacttcctttggtgatgaacagca 619
Query: 421 atatggaagtgtaagtggaataaaccctttcctccccaactgcttcttggtcatcatgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atatggaagtgtaagtggaataaaccctttcctccccaactgcttcttggtcatcatgtt 679
Query: 481 tgtgcaggaatagaaatcctgactaagagacctaccatgtgggttcatcaggctccttgg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtgcaggaatagaaatcctgactaagagacctaccatgtgggttcatcaggctccttgg 739
Query: 541 caagtgtttttattgctaagccacctttctagttcctcttattgtcatttaatctggatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 caagtgtttttattgctaagccacctttctagttcctcttattgtcatttaatctggatt 799
Query: 601 tccttgatgattctgagtattctatgagctttttacatatgctacatatttgtgaagtat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tccttgatgattctgagtattctatgagctttttacatatgctacatatttgtgaagtat 859
Query: 661 ctatacaaa 669
|||||||||
Sbjct: 860 ctatacaaa 868
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_p20.g1 MSMg01no484_p20.g1 CHROMAT_FILE:
MSMg01no484_p20.g1 PHD_FILE: MSMg01no484_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:45 2005
(670 letters)
>mm_chr18_52871586_52872655
Length = 1070
Score = 551 bits (285), Expect = e-161
Identities = 318/329 (96%), Gaps = 3/329 (0%)
Strand = Plus / Minus
Query: 1 atttgtcagatcgaaaagctgctgctgctgttggctttgggcagagcatttggagtttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 327 atttgtcagatcgaaaagctgctgctgctgttggctttgggcagagcatttggagcttct 268
Query: 61 gttcatcaaagatgatgctatctatacagaggtatttaatatctttcttttagagatttt 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gttcatcaaagatgatgctgtctatacagaggtatttaatatctttcttttagagatttt 208
Query: 121 tatttcttgatgtgagctgtgaggtttttgtaagtgtctttatcatgttgaggaaacgtc 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 207 tatttcttgatgtgagctgtgaggttttt-taagtgtctttatcatgttgaggaaacgtc 149
Query: 181 ctttggtgcctaaattaaataagctaataaggagttttataaagaaggacagtgaagcat 240
|||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 148 ctttggtgcctaaattaaataagctaatcaggagttttataaagaaggacactgaagcat 89
Query: 241 ggaaag-gcctttctgtaaactgactggtcttattgtacggttttgccttcagtctgtga 299
|||||| || ||||||||||||||||||||||| | ||||||||||||||||| ||||||
Sbjct: 88 ggaaagtgc-tttctgtaaactgactggtcttagtctacggttttgccttcagcctgtga 30
Query: 300 gtgcgtttttccacattgatctgtgtata 328
||||||| |||||||||||||||||||||
Sbjct: 29 gtgcgttcttccacattgatctgtgtata 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
