Query= MSMg01no488_d08.b1 MSMg01no488_d08.b1 CHROMAT_FILE:
MSMg01no488_d08.b1 PHD_FILE: MSMg01no488_d08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:03 2005
(697 letters)
>mm_chr18_82103954_82105051
Length = 1098
Score = 1282 bits (663), Expect = 0.0
Identities = 684/691 (98%), Gaps = 1/691 (0%)
Strand = Plus / Plus
Query: 7 ggaattcctgattttcttcttggacacagtcatgtcttctgtgcagtttcaaaggggctt 66
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggaattcctgactttcttcttggacacagtcatgtcttctgtgcagtttcaaaggggctt 266
Query: 67 ctctctgattatgtccccggacttgcttagtttcgtatctgaattaagtgtcttcgtcat 126
||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||
Sbjct: 267 ctctctgattatgtccccggacttgcttagttttgtatccgaattaagtgtctttgtcat 326
Query: 127 ctccttagcccaataagagaatatgaattcctaagacaggcctgtggctgtgcatgtcag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctccttagcccaataagagaatatgaattcctaagacaggcctgtggctgtgcatgtcag 386
Query: 187 tgaagcaaacgcagtgtagcatagaggaataggcaaggtaactgcagtagagtcatcagg 246
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cgaagcaaacgcagtgtagcatagaggaataggcaaggtaactgcagtagagtcatcagg 446
Query: 247 cagcagctagggacacttgcccagcaacactgagaagtcaactcaagctagcacaatgct 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 cagcagctagggacacttgcccagcaacactgagaagtcaactcaagctagcacaatgct 506
Query: 307 cagtgtgcggagtttagattaagcagaggaagctcctccagagcctgcctgtgctcgccc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cagtgtgcggagtttagattaagcagaggaagctcctccagagcctgcctgtgctcgccc 566
Query: 367 atcctgagctgaagctcacagccacccagagatgtatttccttatgactc-gaaggcttg 425
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 567 atcctgagctgaagctcacagccacccagagatgtatttccttatgactcagaaggcttg 626
Query: 426 ggtgagcacatttaggccctcctcctctggtgagtgctggaaaactggttatgcctgcct 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ggtgagcacatttaggccctcctcctctggtgagtgctggaaaactggttatgcctgcct 686
Query: 486 gggatggactgcctagacctgagctgaccaaagtcgaaacgcaagccatcaaaatcccac 545
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 687 gggatggactgcctagacctgagctgaccaaagtcaaaacgcaagccatcaaaatcccac 746
Query: 546 tccaaaaagaagtttgaagcactacccaaaacagctctgtaggctgaccctggaacacag 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tccaaaaagaagtttgaagcactacccaaaacagctctgtaggctgaccctggaacacag 806
Query: 606 gaaacagcaagactgtgtatctgtctgaatgcatacaatgtatcttttctttactactaa 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 gaaacagcaagactgtgtatctgtctgaatgcatacaatgtatcttttctttactactaa 866
Query: 666 aggcagagtatacacatccatttgctacatt 696
|||||||||||||||||||||||||||||||
Sbjct: 867 aggcagagtatacacatccatttgctacatt 897
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1098
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1088
Effective search space: 747456
Effective search space used: 747456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_d08.g1 MSMg01no488_d08.g1 CHROMAT_FILE:
MSMg01no488_d08.g1 PHD_FILE: MSMg01no488_d08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:03 2005
(652 letters)
>mm_chr18_82220206_82221257
Length = 1052
Score = 946 bits (489), Expect = 0.0
Identities = 513/521 (98%)
Strand = Plus / Minus
Query: 1 aaggtagggtagctgtgcctgtgagcattttagtcgcttatgaccaccatcctgtgacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aaggtagggtagctgtgcctgtgagcattttagtcgcttatgaccaccatcctgtgacag 462
Query: 61 gagaacacagcctgaggtacctgtttgattaaatacatgctcagatattaagaattctca 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gggaacacagcctgaggtacctgtttgattaaatacatgctcagatattaagaattctca 402
Query: 121 gaggacccaggctgtgatactgcaatttccacccaaggataaaagtagcaggcatgaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gaggacccaggctgtgatactgcaatttccacccaaggataaaagtagcaggcatgaaaa 342
Query: 181 cagtgtaatgagcaagtcgccatggggacggttgagaatatttgctggtatccctctgcc 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 341 cagtgtaatgagcaagtcgccatggggacagttgagaatatttgctggtatccctctacc 282
Query: 241 ggaggacattcatctgtttgtatcaagcaattcctggttgctatgattctgacagaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ggaggacattcatctgtttgtatcaagcaattcctggttgctatgattctgacagaaatt 222
Query: 301 ccagagattaaaaaatggtgggatgaatttgaaaattgctctttctaactctatgaagaa 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 221 ccagagattaaaaaatggtgggatgaatttgagaattgctctttctaactctatgaagaa 162
Query: 361 ttgggttggaattttgatggggattgcattgaatctgtagattgttttcagcaagatagc 420
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 161 ttgggttggaattttgatggggattgcattggatctgtagattgttttcagcaagatggc 102
Query: 421 ccctttaactatattaatcctcccagtctatgatagtgaaaactgttttcaacaataaaa 480
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 101 ccctttaactatattaatcctcccagtccatgatagtgaaaactgttctcaacaataaaa 42
Query: 481 gaacttctggggaaatcagcatctcagacctcaagctgtac 521
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 gaacttctggggaaatcagcatctcagacctcaagctgtac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|