TTTTCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCACAGATTTCTAAGCAGGTTTTAAACACTGGGGCACATT
TTCTAAAGATCAGCCTGGAATGTCTGAATTACTTGGCCTCAACTCTAGCA
TCATGTTCCAGACAGGAAGGTTTGGAGAAAATCATGGCTCATAGCATACT
CAAACATTTTGGTTTCAATAGTAGATTATATATTTGGTTTCAATTGGAGT
GGCTTAGATATTGGTAATTTTAAAAAATAGTCTTCCAAGGTACTGTAAGG
CCAATTGAAAACAAAGTCCAATGCCATATTATCCAATCTTCTTTCAAGAA
AAGGCCCCAACATACACCAGACCCTGACCCTGTTCCTTGGATACATATCA
TTTATTGCATGGCACTCACTAACATTTTAAATTACAAATATAGACTTTGA
TTGTTTTATAATGTATATATGCATATCTCTCTCTTCCTTTCTCTCTTCCT
CCTTCCCTCTCTCTCTGTCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTGNTGTGTGTGTGTGTGTGTGTGTGTGTGCGCATCCATGGG
AGAGGCAAGGTCCTGACACGATGAGAAACCGCCCAGACGAACCCTTGTCA
TGTTGGACAGATAATGGACTGCACCTATCGTGCTGGTAAACAAGAGTACC
CAGATTCTTCCGGTGGACTTCTCCTGGCAAATGTGGAGTGAGTGAATTTC
TATTGCCCA

NCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAAGCCCAGGGTCGGCTCAATGACTAC
CTAGGGCATTGGTGAAGGCCAGGAAGTAAAGTTCGATTTTGCTTAGGTAT
TTGGCAAGTCATTGCTGAGAGGCACCTATAACAAAACAATACTGAAAGGA
AGCACACAGATCTATTCGCAAGGACAAAATTGGAGCATACGTGCTATGGA
ATGCCACAGTTCCAGGAGACTAAGTTTCAGTGAAACTCTTTGCCTCAGGA
CTGCATCCAGGCTTTTGGCCTGTCATGCGTGTCACTACTGGAGTGGATGT
ATCACAGGACTCTCTGTATTGGGAGAACTGGGTCCCAATGATACTGAGTG
GTCTTGGTTTCTGTTAGTAAGATTCTCACGTTTGCCTTTCACCATCTTTT
CAATCTCTGGTGTTAGCTGTCCTTGCTGTCTCTGGCTGGATCTTGTTCCT
CCTGTTATTTTGTGAGCCTCTGTCAGCACTCTTGGGTGTCCAAATCTCTT
CTGAGTCCCAGTGGTCAGAGCACTCTTTGCATGCAAGCTCTCCTCTTGCA
GGGAAGGTGCACAGAGGTCTGGAGCTCATCTCTGTCTCCTGGCTGAGGAT
AAAGGCCAGAAGAGACCCTGTTGCTTCTGAGGACTGCATGCTCTCCACAG
TTGACTGGTCACTGGACCATATTCTTTACATATATGTATGCACTTATATT
ATTATTCTTTGCGTATATAAC

Query= MSMg01no489_c21.b1 MSMg01no489_c21.b1 CHROMAT_FILE:
MSMg01no489_c21.b1 PHD_FILE: MSMg01no489_c21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:19 2005
         (516 letters)



>mm_chr18_48605931_48606846
          Length = 916

 Score =  930 bits (481), Expect = 0.0
 Identities = 509/529 (96%), Gaps = 19/529 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagcaggttttaaacactggggcacattttctaaagatcagcctggaatgtctgaattac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagcaggttttaaacactggggcacattttctaaagatcagcctggaatgtctgaattac 260

                                                                       
Query: 61  ttggcctcaactctagcatcatgttccagacaggaaggtttggagaaaatcatggctcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggcctcaactctagcatcatgttccagacaggaaggtttggagaaaatcatggctcat 320

                                                                       
Query: 121 agcatactcaaacattttggtttcaatagtagattatatatttggtttcaattggagtgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcatactcaaacattttggtttcaatagtagattatatatttggtttcaattggagtgg 380

                                                                       
Query: 181 cttagatattggtaattttaaaaaatagtcttccaaggtactgtaaggccaattgaaaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttagatattggtaattttaaaaaatagtcttccaaggtactgtaaggccaattgaaaac 440

                                                                       
Query: 241 aaagtccaatgccatattatccaatcttctttcaagaaaaggccccaacatacaccagac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagtccaatgccatattatccaatcttctttcaagaaaaggccccaacatacaccagac 500

                                                                       
Query: 301 cctgaccctgttccttggatacatatcatttattgcatggcactcactaacattttaaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgaccctgttccttggatacatatcatttattgcatggcactcactaacattttaaat 560

                                                                       
Query: 361 tacaaatatagactttgattgttttataatgtatatatgcatatctctctcttcctttct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tacaaatatagactttgattgttttataatgtatatatgcatatctctctcttcctttct 620

                                                                       
Query: 421 ctcttcctccttccctctctctct--gtctctgtctctgtctct---------------- 462
           ||||||||||||||||||||||||  |||||||||||| |||||                
Sbjct: 621 ctcttcctccttccctctctctctctgtctctgtctctttctctttctctctctctctct 680

                                                            
Query: 463 ctctctctctctctctctctctctctgntgtgtgtgtgtgtgtgtgtgt 511
           ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 681 ctctctctctctctctctctctctctg-tgtgtgtgtgtgtgtgtgtgt 728


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space:   458436
Effective search space used:   458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)