NCCCTATXXXXXXXXXXXXXXXXXXXXXXXXCTATTTCGAGAAGAGGCGC
GGAATTCCAGGACAGTCAATAAACAATTTCAGGAAACAAATAAATACCCA
GAGAAAGCCAGGGAAACACAAACAAACAATTGAAGGAAATGACTAAATTC
CCTTAAAGAAAAATAAAAACAAACAAAAACCAAAAAGCAAACAAAACAAA
ACAAAGCAAACAAACAAAAATCAAGCAGTTGAATGAAACAAATAAAACTA
TTCAAGACCTAAAAATTGATATAAACACAATAAAAAAGGAATTCTGAGAA
TGAAATTTTAGGAATGCAAACAGGATCTATAGAGGCAAGTTTCATCAATA
GAATACAAGAGTTGTATTCATCTTCAGGCCTTGAAGAGATGATAGAAGCA
ATAGATACATTGGTCAAAGGCAACGTTAAAACAAACAAACAAAAATACCT
GATAAAAATATCCAAAAAATATGAGACAGTATAAAAAAGATGAAACCTAA
AAATATTAGAAATAGAGGAAGGAGAAAAAAACCTAGCTGGAAGGTCCATG
AAATATTATCAACAAAATCATAAAAGAAAATCTCCTAACCTAAGTAGCGG
AATGACTATAGCAGAATTGGGACTATACAGAACATCAAATAGATTGGATC
AGAAATGAAATTCTCCTCAGCATATAATAATCAAAAAACTAAGCATACAG
AAATAAGAAAGGATAATAAAAGCTGGCAGGGAAATGGCTGAGTAGCATAA
ATGCAGACCTATCAGAATT

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATTCTCATGCAAGAAAGGTTTTCCC
TTTATTAATGAATACTTTAATCCTTAAAATATCACTCTGAATTAGTCATA
CATGACTACTTTCATTTTGTTTCAAAATTAAAAATAAAATGTATATTCTA
ACTAAAGTTAACCCTTTCTGATTTTCTTTGGAACAAAGAAACTCCAGTGT
TATTAATAGTATGGCCATAGGCTTTACACTGGAAGCCTTAAATTGGTCAT
AGCTTTTAGGACAAGTTCTCTATCCCCCTTCCTTATGTGTATATTAGTAT
CTATATATTTTCATGGTCATATCATTCATTCATTTATTCATTTTATATCC
ATTTGTCATTAATGTACATTTGCAATATCAAGGGCTACTAAAATGGAAAA
GTCTGCACATGGAAAAAAAGGTTTTGTCATAAGGGCACTTAAGATAAAGT
AACAAAAACTTTAACCCAAAGAGTACCATTAAATCTCTATTCAGATACAT
GAAGCTAATTTAGAGGCAGAACAAAAGCTATAAGAAAGGAAAACATATGA
TATTTCATTTTAGTGATTTGATTTTAGAAAATGCCATGGAAGCAGATCAG
ATAGGAATAGGATAGCCGAGAAATGGAGGCAGTCAACTGGGTTTTCTTCT
GGTGTACGTTCTTCTTAGAATCCACCTTCTGATAAGTATG

Query= MSMg01no489_l18.g1 MSMg01no489_l18.g1 CHROMAT_FILE:
MSMg01no489_l18.g1 PHD_FILE: MSMg01no489_l18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:05 2005
         (543 letters)



>mm_chr18_27174260_27175202
          Length = 943

 Score =  806 bits (417), Expect = 0.0
 Identities = 472/495 (95%), Gaps = 10/495 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttccctttattaatgaatactttaatccttaaaatatcactctgaattagtcatacatga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ttccctttattaatgaatactttaatccttaaaatatcactctgaattagtcatacatga 427

                                                                       
Query: 61  ctactttcattttgtttcaaaattaaaaataaaatgtatattctaactaaagttaaccct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ctactttcattttgtttcaaaattaaaaataaaatgtatattctaactaaagttaaccct 367

                                                                       
Query: 121 ttctgattttctttggaacaaagaaactccagtgttattaatagtatggccataggcttt 180
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 366 ttctgattttctttggaacaaagaaactccagtgttattaatagtctggccatgggcttt 307

                                                                       
Query: 181 acactggaagccttaaattggtcatagcttttaggacaagt-tctctatcccccttcctt 239
           ||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||
Sbjct: 306 acactggaagccttaaattggtcatagctttcaggacaagtgt-tctatcccccttcctt 248

                                                                       
Query: 240 atgtgtatattagtatctatatattttcatggtcatatcattcattcatttattcatttt 299
           |||||||||||||||||||||||||||||| | |||||||||        ||||| ||||
Sbjct: 247 atgtgtatattagtatctatatattttcattgccatatcatt--------tattcgtttt 196

                                                                       
Query: 300 atatccatttgtcattaatgtacatttgcaatatcaagggctactaaaatggaaaagtct 359
           ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||
Sbjct: 195 atatccatttgtcattaatgttcatttgcaataacaagggctactaaaatggaaaaatct 136

                                                                       
Query: 360 gcacatggaaaaaaaggttttgtcataagggcacttaagataaagtaacaaaaactttaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gcacatggaaaaaaaggttttgtcataagggcacttaagataaagtaacaaaaactttaa 76

                                                                       
Query: 420 cccaaagagtaccattaaatctctattcagatacatgaagctaatttagaggcagaacaa 479
           |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||  |
Sbjct: 75  cccaaagagtaccattaaatctatatccagatacatgaagctaatttagaggcagaagga 16

                          
Query: 480 aagctataagaaagg 494
           |||||||||||||||
Sbjct: 15  aagctataagaaagg 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space:   497289
Effective search space used:   497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)