NCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCTGCCTTTCCTCTCAGTCTGGCATGGCGCACCTCAGGGTCAAG
GCCCCATGCCAGTGGCCTCCAGTGAGGACTGCTTTGCCTGAGCACACCCC
ACAGAGGATCTGCATCTCAGTCGGGTATGGAGGGGTCCTCGCAATTGTGG
CATGGGGGGCAATCTCACCCCTCAGCACCACAGCAATGGCAAGCTCCTCT
CTCCCACTTGCTCTGCCTCACTCGGCCTTACTCCACCTCATTGGGCCTAG
TATATGATACAGCCCAGATGTGAGTGCAAGGGGGATGGGAATGGGAAATG
GGGGCGGGGCTGCCCGAGGAGGCTTGGGAGTGCAAAGGAGGGAACACAGA
GCCTGCCACCTGAGGCTATGCTCCAGCAATGCTCCCAACTTGCCACGCTG
GGCCACTGATGTCTCAGGGACCGCCCCTCATCTGCTCCAGGTCCATGGGA
GCAGCCTGTGGTCTGCCACCTTGGAGATCAAGTATGGTGGCTGCACCTAC
ACCCTACTGCCTGCTTCCTGGAGTTGGGGAGAAAAGAGGGAATAGGGCCG
TGATGGAGGACCCGAAAGGAGGAGATCAGCGTTAGTTTCTGACAGATTTT
CTTAGGCTTTTCCCAGAGGGCATAAATAGCAACCAGTAGTGGACCTCTGT
ATGGGAGTAAAGGGCAGGCCTAGAGGGATAGGTAGTGTCTGTCCCACGAT
TCTCACAATAG

CCCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAATGCACCACTCTTGTGTTTGTGA
GGATGTTGGTGTGCAAATCTATTCTCTTCTCAGTTGTGATAAAACTAGAA
ACAATCATTGTAAAAAAAAATACACAGTAAGGAAAAATAACTGCTACTGT
TTTAATTTTTTTGCACTATACATGTTGTTATTACATGTTATACATGTTAA
GCTAGTCCCCCCCACTTTGTTAAATATATTTACTTAAAAAATGAAATAAA
GAAAAACAGTGGTCCCTTTCTTGCTTTATCCAAACTTTCTAGCCCTTAAG
TGCTGCATGGTTTATTCCAAGAACCAGGCAGCCAGAGACTGAAATCCAAT
AAAAAAATGGCTAGCCCTAAAATCATGTAATGCAAGTAACACCAAACCGG
CTAAGACAGCTCTATTCTTATATTTAGGTACACACACCATAATTAAAGAA
TAAGAATGAAAGAAAGTGAGTTAATTAGAAATAATAATAATAATAAAACA
TTATCCAGAAGCAGCAAGTGGAGTACATGGGAAGAATTGGAAGGAGCATA
TATAAAATGATATGATTTAAAAAATAGTTTGTTAATGTTCTGCTAGCAGA
ACTTCGCATATCTCCTATTAAATCTATCTCTGTATTTTATTATTTTCTCC
CATACTTTTTTAAAATCTCAGGTTGTTTATTCAGGATGATGCTAGAAAAA
AAGTTAGTACCN

Query= MSMg01no490_b17.g1 MSMg01no490_b17.g1 CHROMAT_FILE:
MSMg01no490_b17.g1 PHD_FILE: MSMg01no490_b17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:35 2005
         (686 letters)



>mm_chr18_18364984_18366072
          Length = 1089

 Score =  971 bits (502), Expect = 0.0
 Identities = 515/520 (99%), Gaps = 3/520 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatgcaccactcttgtgtttgtgaggatgttggtgtgcaaatctattctcttctcagttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aatgcaccactcttgtgtttgtgaggatgttggtgtgcaaatctattctcttctcagttg 461

                                                                       
Query: 61  tgataaaactagaaacaatcattgtaaaaaaaaatacacagtaaggaaaaataactgcta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tgataaaactagaaacaatcattgtaaaaaaaaatacacagtaaggaaaaataactgcta 401

                                                                       
Query: 121 ctgttttaa-tttttttgcactatacatgttgttattacatgttatacatgttaagctag 179
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ctgttttaattttttttgcactatacatgttgttattacatgttatacatgttaagctag 341

                                                                       
Query: 180 t--cccccccactttgttaaatatatttacttaaaaaatgaaataaagaaaaacagtggt 237
           |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tcccccccccactttgttaaatatatttacttaaaaaatgaaataaagaaaaacagtggt 281

                                                                       
Query: 238 ccctttcttgctttatccaaactttctagcccttaagtgctgcatggtttattccaagaa 297
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ccctttcttgctttatccaaactttctagcccttaagtgctgcatggtttattccaagaa 221

                                                                       
Query: 298 ccaggcagccagagactgaaatccaataaaaaaatggctagccctaaaatcatgtaatgc 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ccaggcagccagagactgaaatccaataaaaaaatggctagccctaaaatcatgtaatgc 161

                                                                       
Query: 358 aagtaacaccaaaccggctaagacagctctattcttatatttaggtacacacaccataat 417
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 aagtaacactaaaccggctaagacagctctattcttatatttaggtacacacaccataat 101

                                                                       
Query: 418 taaagaataagaatgaaagaaagtgagttaattagaaataataataataataaaacatta 477
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 100 taaagaataagaatgaaagaaagtgagttaattagaaatagtaataataataaaacatta 41

                                                   
Query: 478 tccagaagcagcaagtggagtacatgggaagaattggaag 517
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 40  tccagaagcagcaagtggagtacatgggaagaattggaag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1089
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1079
Effective search space:   729404
Effective search space used:   729404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)