Query= MSMg01no490_h09.b1 MSMg01no490_h09.b1 CHROMAT_FILE:
MSMg01no490_h09.b1 PHD_FILE: MSMg01no490_h09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:03 2005
(656 letters)
>mm_chr18_66950300_66951358
Length = 1059
Score = 1096 bits (567), Expect = 0.0
Identities = 630/657 (95%), Gaps = 17/657 (2%)
Strand = Plus / Plus
Query: 5 gaattcctc-aattttcctggtatataacatctagaaacccagttggcattcgttgcctg 63
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcaaagtttcctggtatataacatctagaaacccagttggcattcgttgcctg 264
Query: 64 tggaacacccctacctgtctctaggct--agatgtctctgtgattctgaaaaaga-acaa 120
|||| || ||||||||||||||||||| ||||||||| |||||||||||||||| ||||
Sbjct: 265 tggagca-ccctacctgtctctaggctagagatgtctcggtgattctgaaaaagatacaa 323
Query: 121 tccactttttaaaagattcattagtttattttatttatattagtacactatagctgactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tccactttttaaaagattcattagtttattttatttatattagtacactatagctgactt 383
Query: 181 cagacacaccagatgagggcattgatcggatcccattacagatggtaaccaccatatggt 240
||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 384 cagacacaccaga---------tgatcggatcccgttacagatggtaaccaccatatggt 434
Query: 241 tcctgggaattgaactcaggacctctggaacagcagtcagtgctcttagccactgagcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tcctgggaattgaactcaggacctctggaacagcagtcagtgctcttagccactgagcca 494
Query: 301 tctctccaaccccaatccattattttttaatgatcgcatttattaattatctctccctat 360
|||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tctctccaactccaatcaatt-ttttttaatgatcgcatttattaattatctctccctat 553
Query: 361 cttactgcttcctcctccacacttctaattgcaaggcaacttttagaagttcattctctc 420
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 554 cttactgcttcctcctccacacttctagttgcaaggcaacttttagaagctcattctctc 613
Query: 421 cttccaccacgtagtttctgaggatagacttgggtccttagtctcggcaatgcctttagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 cttccaccacgtagtttctgaggatagacttgggtccttagtctcggcaatgcctttagc 673
Query: 481 tgctgaacgagccatctcatccatcatgaggcctggcaattcgtttt-tctcctacacat 539
|||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 674 tgctgaacgagccatctcatccatcatgaggcctggcaattc-ttttctctcctacacac 732
Query: 540 cagaatgtctcagatatttcacgtttttaagcattcatatgtgtgcactctttctaataa 599
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 733 cagaatgtctcagatatttcacttttttaagcattcatatgtgtgcactctttctaataa 792
Query: 600 aacataattgccactcaagaacttaaagtacttggcaacctgtgatataaattcaaa 656
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 aacataattgccactcaagaacttaaagtacttggcaacctgtgatataaattcaaa 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1059
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1049
Effective search space: 677654
Effective search space used: 677654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_h09.g1 MSMg01no490_h09.g1 CHROMAT_FILE:
MSMg01no490_h09.g1 PHD_FILE: MSMg01no490_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:03 2005
(642 letters)
>mm_chr18_67090898_67091934
Length = 1037
Score = 988 bits (511), Expect = 0.0
Identities = 538/549 (97%), Gaps = 5/549 (0%)
Strand = Plus / Minus
Query: 1 tatagttttcttactgatgtaaataaaagcttgagtgtgtaaggctcatagaaaaaaaaa 60
||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||
Sbjct: 544 tatagttttcttactgatg----taaaagattgagtgtgtaaggctcatag-aaaaaaaa 490
Query: 61 accaaaagattattattgtaaggtaataattaagccatgtttccttcaaataacatttac 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 489 accaaaagattattattgtaaggtaatacttaagccatgtttccttcaaataacatttac 430
Query: 121 ttttcccaatgacttagacttaatgctttttagcagaaacttgcttcagctcagtttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttttcccaatgacttagacttaatgctttttagcagaaacttgcttcagctcagtttgat 370
Query: 181 tggtaacttcaatagggactgcattttccccattcattagcagatactatagaatttccg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 369 tggtaacttcaatagggactgcattttccccattcattagcagatactatagaatttctg 310
Query: 241 tgtcacattgccggtacaatggctatataggaaggaagtaactattttttgcatcatatc 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgtcacattgccagtacaatggctatataggaaggaagtaactattttttgcatcatatc 250
Query: 301 cctgggaagcaaaaggattcctcccctcactcctgattttgtatattactgtgtggtgaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cctgggaagcaaaaggattcctcccctcactcctgattttgtatattactgtgtggtgag 190
Query: 361 cacacaccacagcatgcgggcaagggatcagagaacaacttgtggtgtttgttttcctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 cacacaccacagcatgcgggcaagggatcagagaacaacttgtggtgtttgttttcctgc 130
Query: 421 caacttacatggatccccagtgatcaaactcaggctggtaggcttgtgtggctgccatct 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 caacttacatggatcctcagtgatcaaactcaggctggtaggcttgtgtggctgccatct 70
Query: 481 tacctattcttgcacttattcttaattactgtctagcattcaacaatgccttttgtttgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 tacctattcttgcacttattcttaattactgtctagcattcaacaatgccttttgtttgt 10
Query: 541 aacaatttg 549
|||||||||
Sbjct: 9 aacaatttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1037
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1027
Effective search space: 649064
Effective search space used: 649064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
