Query= MSMg01no495_e04.b1 MSMg01no495_e04.b1 CHROMAT_FILE:
MSMg01no495_e04.b1 PHD_FILE: MSMg01no495_e04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:18 2005
(526 letters)
>mm_chr18_61174392_61175316
Length = 925
Score = 984 bits (509), Expect = 0.0
Identities = 518/521 (99%), Gaps = 1/521 (0%)
Strand = Plus / Minus
Query: 6 gaattcatcattgtcataccggacatggacatccatcataatacagcaagactcaggaag 65
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gaattcatcattg-gataccggacatggacatccatcataatacagcaagactcaggaag 667
Query: 66 tacactccgcccatcttggccacctggggctcctaggggcagaaacagcagggagaagct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tacactccgcccatcttggccacctggggctcctaggggcagaaacagcagggagaagct 607
Query: 126 cctggcttgctagctgtatctcagaggctggggaggaagagacagctccccgcccccacc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 cctggcttgctagctgtatctcagaggctggggaggaagagacagctccccgcccccacc 547
Query: 186 ccagctcgggaactctggaatccagtcctcctctcaaaccccaaaggtcagagcagactc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ccagctcgggaactctggaatccagtcctcctctcaaaccccaaaggtcagagcagactc 487
Query: 246 taccccggcatcttccaaatgtggatgctgaatgtctaaagagggcatctttagaggaca 305
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 486 taccccggcatcttccaaatgtggacgctgaatgtctaaagagggcatctttagaggaca 427
Query: 306 tggattgtcccatacctggcttcaaatggtggtttatcccagcaaactagaccacggatt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tggattgtcccatacctggcttcaaatggtggtttatcccagcaaactagaccacggatt 367
Query: 366 gcctcattccctccagttatcacttaaccatcctagccgaaggctcaaagaatggtctga 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gcctcattccctccagttatcacttaaccatcctagccgaaggctcaaagaatggtctga 307
Query: 426 gagcttagccaggcatctgctggttggtggccccggttgacagataaaatggatagccca 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gagcttagccaggcatctgctggttggtggccccggttgacagataaaatggatagccca 247
Query: 486 gaggccatagtgctgatagacaggaacctgccttaccgtta 526
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gaggccatagtgctgatagacaggaacctgccttaccgtta 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 925
Length adjustment: 10
Effective length of query: 516
Effective length of database: 915
Effective search space: 472140
Effective search space used: 472140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_e04.g1 MSMg01no495_e04.g1 CHROMAT_FILE:
MSMg01no495_e04.g1 PHD_FILE: MSMg01no495_e04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:18 2005
(234 letters)
>mm_chr18_61041284_61041917
Length = 634
Score = 437 bits (226), Expect = e-127
Identities = 232/234 (99%)
Strand = Plus / Plus
Query: 1 ctagggagataccatgtgtaaggtaggaaaagattgtggaaggaactcagagacaactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagggagataccatgtgtaaggtaggaaaagattgtggaaggaactcagagacaactga 260
Query: 61 tggccttatactcatgtgcacccatatgtgcatgcatgtgcaaacataaacactaagcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggccttatactcatgtgcacccatatgtgcatgcatgtgcaaacataaacactaagcta 320
Query: 121 tcacagctgggaagagatgtgtgcctgccatcctagcatgtggagggaggatcaggagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcacagctgggaagagatgtgtgcctgccatcctagcatgtggagggaggatcaggagtt 380
Query: 181 caacgatagctttaaccatacagtgagtttgagaccagcttgggctacacgaga 234
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaccctagctttaaccatacagtgagtttgagaccagcttgggctacacgaga 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
