NNAACCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCGAAAGAGGA
TCCGCGGAATTCAACCAATGTCTAGAAGAAGCCTACAAACAGATGCATTA
AATTCATATTAATTATCTGAACATCAAGATTTATTTTTCTTACTTACTGT
GCAGCTGCACTGTTCCAGTGTATAGTTGATGAGAACTTATGTGCATATAC
CTGAGCATCCAAAAGCATACCAGAAGCATCCTGCTTCTGGGATTTGCCCA
TGGATACTGAAATGAGCAGATGCTCATTTTCCTTCTTTGATATATCATTT
GTATATAATACTCTAAATCATCTCTATTTTATTTATAATGCATAATACAA
TGTAAATAAGTGAATTAGTAGCTTTTCTGTATTGATTTTAGACTAATGAA
CAATAGAAAAATGGTCTTACATGCAGGATTTTTCCAAAATAGTTTTGATT
CCTGGATGGTTCAAATATATAGAGATAGTGATATAGAGGGCTAACTGTAT
CTATACTATGATTTATAATTGTTCTAAGATGCATTTATTTAATATATGTG
AGTATTTGTGTTCTTTTCAGACACACCAGAAGAGGGCATTAGATCCCATT
ACAGTTGATTGTTGTTGTTCTGGATTTAACTCGGTATACTTAACCACTAA
GCCATCTCTCTAGCTTATGATTTACAATTCATGGTGCAGAGATATATTTC
CATTGTGCATTTTCATGTGTATTAAATAGTTAATAATCCTCTTGCATTCT
TATCAGA

NNNGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGACATGTAAAAAAAGCCCCACA
CTCAATACCCAGTTACAACCACCTCAGCAGAACACTAAGGAGATTAAACT
CCCCTTGGCTGCCACTAAAATCAGCTTGTCTCCATGTTAAGTGTCGATGT
AGGTTTTGTGGAAGTTCTGTCTTCTTTTCTAACCCACTTTCATTTCAAGA
TTGAACAAAACATAGGAGGATGGTGCCCTGTGGGGCCTTGACACGCATAT
AGCCTCAGTCTAGTAATCTCTCTGTTCATGTGTTTACAACAACAGATGCT
TGTGATAGAGAAAGCCCCATAGGATGGGTGAGGTCTGAGATTCTGACCAC
AAATTCTTCCCATTGTTTTTATGTTAATTTTATGCTTGTGTGGCCATCTT
CTTTTGGGTTTGTTGAAAGAAGATTACTTTCTTACTTTTTCTAGGGTGTA
GTTTCCCTCCTTGTATTGGCGTTTGCCATCTCTTATACTTTGTAGGACTG
GTTTGTGGAAAGATATTGTGTAAATTTGTTTTTTGTCATGGAATATCTTG
GTTTCTCCATCTATGGAAATTGAGAATTTTGTTGGTTATCGTAGCTTGGG
GTAGTATTTGTGTTCTCTAAGGGTCTGTATGACATCTGCCCAGGATCTTC
TAGCTTTCATAGTCTCTGGTGAAAGTCTGACATAATTCTGATANGTGTAC
CTTTATTATGTA

Query= MSMg01no496_d11.b1 MSMg01no496_d11.b1 CHROMAT_FILE:
MSMg01no496_d11.b1 PHD_FILE: MSMg01no496_d11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:28 2005
         (675 letters)



>mm_chr18_16322557_16323631
          Length = 1075

 Score = 1154 bits (597), Expect = 0.0
 Identities = 657/677 (97%), Gaps = 4/677 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctacaaacagatgcattaaattcatattaattatctgaacatcaagatttatttttctta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 ctacaaacagatgcattaaattcatattaattatctgaacatcaagatttatttttctta 925

                                                                       
Query: 61  cttactgtgcagctgcactgttccagtgtatagttgatgagaacttatgtgcatatacct 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 924 cttactgtgcagctgcactgttccagggtatagttgatgagaacttatgtgcatatacct 865

                                                                       
Query: 121 gagcatccaaaagcataccagaagca-tcctgcttctgggatttgcccatggatactgaa 179
           |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 864 gagcatccaaaagcataccagaagcact-ctgcttctgggatttgcccatggatactgaa 806

                                                                       
Query: 180 atgagcagatgctcattttccttctttgatatatcatttgtatataatactctaaatcat 239
            ||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||
Sbjct: 805 gtgagcagatgctcattttccttctttgatatattatttacatataatactctaaatcat 746

                                                                       
Query: 240 ctctattttatttataatgcataatacaatgtaaataagtgaattagtagcttttctgta 299
           |||||  | ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 745 ctctaggtgatttataatgcataatacaatgtaaataaatgaattagtagcttttctgta 686

                                                                       
Query: 300 ttgattttagactaatgaacaatagaaaaatggtcttacatgcaggatttttccaaaata 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttgattttagactaatgaacaatagaaaaatggtcttacatgcaggatttttccaaaata 626

                                                                       
Query: 360 gttttgattcctggatggttcaaatatatagagatagtgatatagagggctaactgtatc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gttttgattcctggatggttcaaatatatagagatagtgatatagagggctaactgtatc 566

                                                                       
Query: 420 tatactatgatttataattgttctaagatgcatttatttaatatatgtgagtatttgtgt 479
           ||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||
Sbjct: 565 tatactatgatttataatttttctaagatgtatttattttatatatgtgagtatttgtgt 506

                                                                       
Query: 480 tcttttcagacacaccagaagagggcattagatcccattacagttgattgttgttgttct 539
           ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 505 tcttttcagacacaccagaagagggcattagatcccattacagatgattgttgttgttgt 446

                                                                       
Query: 540 ggatttaactcggtatacttaaccactaagccatctctctagcttatgatttacaattca 599
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggatttaactcggtacacttaaccactaagccatctctctagcttatgatttacaattca 386

                                                                       
Query: 600 tggtgcagagatatatttccattgtgcattttcatgtgtattaaatagttaat-aatcct 658
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 385 tggtgcagagatatatttccattgtgcattttcatgtgtattaaatatttaattaa-cct 327

                            
Query: 659 cttgcattcttatcaga 675
           |||||||||||||||||
Sbjct: 326 cttgcattcttatcaga 310


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space:   708225
Effective search space used:   708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)