NNNCCTCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCATTTTATCTTTTCTTTCTCTTGAACAAGATGAAAGTAGCA
TGCTAATAATGTGCTAAGAACAAAATAAAATGTCTCCAAACACTAAGTAT
TAAATCTGTCAATGAACTATACACCTGGAACCTGAAAAGACTGTGGTTTT
ATAGAAAATTTAACTCCATAGCATACTAATGTTTTGGACATAAAAATCTT
ATTTTTTATATTAAAAGCATTTTTTTTTAATTTGCAATTAACTTCGGAAA
TCATCCTCAACACTTTCACTTTTCTAATCTTTATTTTTAAGTGTTCCTAA
AAGAGAAAGACTATGTTGTTAGAGTATGGCAAATTCACTTCTTCCTCTCT
ATGACAACAGATAAAGAAACTGTAACCATGGAAACAGTAATGGGCCAGAG
AGATTAGGGCCAGACAAGAGATTAGGCCTCTCAGAGCAGTGAAAGGGTTC
TGATTGGTTCCTTATTAAGACCTTATTTGAAGAGAAGTTACAGAAAGCAT
GGGGGATTAGCATGGGCAGAAATAATTCCCCTATATAATGCAAGAAACTA
TTTCTTTGTGTTTGTTTTGTTTTGTTTTGTTTTTTTATATTCTTTTCATA
TGACAGCTCTTTAAACAGAGGGGGAAAAACTTCCCTGGAATCCTGCTGTT
CTCAATTTTGTCTGTACCATCTAAGGCTGAAACAGCTGACTAAACTCCGA
AACCCAGGCAGGGGAGAAAAAACATCTCCTGG

GGGGTGTCTTTGCCGTGGGGGCCGGGAGTGTGGGGCGTTTTCTCTTTCTT
ATGAGGTGGGGCCGTTGCGCTTTTTCTTCTTCCGGGGGGGCGTCTTAATT
ATTAATGATATTTATATGTGGTGCGCGTGTCGCAAGTTCTGCTTCTCGTC
CTCTGACCACTCCGTCCTTCGCTTCTGGTATGAAGTTGTCTAGATTCTAT
CTCTTACCGCGGGATCACCTTCTTCCCGATACACAATACACTGGAACGTC
GCGTCATCTATAATATTTTATAATCAACTCTTTTTTCACACTCTGCGGCT
TTTTCTATTTATTAATTCCATTGAAACGGACATCGGTTGTTGTACTAACA
TGAAACTTGATCCTGATGTAGGCGGTTAACTATAGTTCATTTTATCTGCA
TCTCCGCCTTCGACTTCCTAACTCGCGCTTGTCTGAGCAGTTAGGGAGCG
GCGAGCTCTCGTCCTATGTATAACCCCGTACAAATTATTATCCTGTCCTG
TTTGTCTTGAGATATGCCGGATTTTCATGATTTTATTCTGCCATTAATAT
TTCTTCCTCCTCCTACGCTTGTGCCGCGCTTTATGTGCTTTCATTCCGCC
TAGGCGTTGCTTGTGTGTGATCACTCACCCTTTTTCCCCTCTTATATTAA
TTCCGAGTTAACTAGCCGCTTTGTAACATCAATTCTTAATACATATAATC
CTCCCGTGCGAGTTCCGTGAGATTATTCACCAGTCGCACCCGTTCTTTCT
TATTTCTTCGTCGTCTTTCTGTAGCCGCGACTCTTGTCGCACGTGCTGTC
CACTCCTGTTTGTCTGTCCCACTCTTCCATTCTCTAGACATGCCCATTTA
TTGTATCGTTCGTTAGTTGTCTTGTCACTCCCTTGTTTATAATGATATGT
TGTCCCTAACGCATCTCCTAGTCTTTCTCTGTCTCTCATGTCCATATATC
TCACCCATCCCTGAATGGTAGAACACCGCATGATATCAATCACTCTCTAC
TCAGTATTACTACGACGNGTGTCGCAAGGATAAATGCGCG

Query= MSMg01no497_m14.b1 MSMg01no497_m14.b1 CHROMAT_FILE:
MSMg01no497_m14.b1 PHD_FILE: MSMg01no497_m14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:35 2005
         (559 letters)



>mm_chr18_71754742_71755699
          Length = 958

 Score =  978 bits (506), Expect = 0.0
 Identities = 521/526 (99%), Gaps = 2/526 (0%)
 Strand = Plus / Minus

                                                                       
Query: 35  caagatgaaagtagcatgctaataatgtgctaagaacaaaataaaatgtctccaaacact 94
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958 caagatgaaagtagtatgctaataatgtgctaagaacaaaataaaatgtctccaaacact 899

                                                                       
Query: 95  aagtattaaatctgtcaatgaactatacacctggaacctgaaaagactgtggttttatag 154
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 aagtattaaatctgtcaatgaactatacacctggaacctgaaaagactgtggttttatag 839

                                                                       
Query: 155 aaaatttaactccatagcatactaatgttttggacataaaaatctta-ttttttatatta 213
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 838 aaaatttaactccatagcatactaatgttttggacataaaaatcttatttttttatatta 779

                                                                       
Query: 214 aaagcatttttttttaatttgcaattaacttcggaaatcatcctcaacactttcactttt 273
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 aaaacatttttttttaatttgcaattaacttcggaaatcatcctcaacactttcactttt 719

                                                                       
Query: 274 ctaatctttatttttaagtgttcctaaaagagaaagactatgttgttagagtatggcaaa 333
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ctaatcttt-tttttaagtgttcctaaaagagaaagactatgttgttagagtatggcaaa 660

                                                                       
Query: 334 ttcacttcttcctctctatgacaacagataaagaaactgtaaccatggaaacagtaatgg 393
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ttcacttcttcctctctatgacaacagataaagaaactgtaaccatggaaacagtaatgg 600

                                                                       
Query: 394 gccagagagattagggccagacaagagattaggcctctcagagcagtgaaagggttctga 453
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gccagagagattagggccagacaagagattaggcctctcagagcagtgaaagggttctga 540

                                                                       
Query: 454 ttggttccttattaagaccttatttgaagagaagttacagaaagcatgggggattagcat 513
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 539 ttggttccttattaagaccttatttgaagagaagttacagaaagcacgggggattagcat 480

                                                         
Query: 514 gggcagaaataattcccctatataatgcaagaaactatttctttgt 559
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gggcagaaataattcccctatataatgcaagaaactatttctttgt 434


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 958
Length adjustment: 10
Effective length of query: 549
Effective length of database: 948
Effective search space:   520452
Effective search space used:   520452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)