Query= MSMg01no499_o01.b1 MSMg01no499_o01.b1 CHROMAT_FILE:
MSMg01no499_o01.b1 PHD_FILE: MSMg01no499_o01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:22 2005
(244 letters)
>mm_chr18_16227148_16227791
Length = 644
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%)
Strand = Plus / Plus
Query: 1 ttttggctctaatagagtgccaatgtagatgctgatccttcatttatctgtgtagttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttggctctaatagagtgccaatgtagatgctgatccttcatttatctgtgtagttgaa 260
Query: 61 accatggctgttcagcacctacggtatttcattatttgagactgtaattgatatgtagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accatggctgttcagcacctacggtatttcattatttgagactgtaattgatatgtagta 320
Query: 121 aaagctgatttcagcaaacaatctgatacccccttttctttctactacaattgctttctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagctgatttcagcaaacaatctgatacccccttttctttctactacaattgctttccc 380
Query: 181 atgttgaattgacaatgagcatagatacatatttgtttcagttccattgtgagttaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgttgaattgacaatgagcatagatacatatttgtttcagttccattgtgagttaagaa 440
Query: 241 attg 244
||||
Sbjct: 441 attg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no499_o01.g1 MSMg01no499_o01.g1 CHROMAT_FILE:
MSMg01no499_o01.g1 PHD_FILE: MSMg01no499_o01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:23 2005
(119 letters)
>mm_chr18_16415351_16415869
Length = 519
Score = 159 bits (82), Expect = 6e-44
Identities = 98/110 (89%), Gaps = 12/110 (10%)
Strand = Plus / Minus
Query: 5 gaaaccaccagctgtgtattcacctcataagactaata------tttttttacctggccc 58
|||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 308 gaaaccaccagctgtgtattcacctcataagactaataaaaaac------tacctggccc 255
Query: 59 atgtagaaaaactataactgaggcacatttgtgtgcatgcatatgtttgt 108
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atgtagaaaaactataactgaggcacatttgtgtgcatgcatatgtttgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 519
Length adjustment: 8
Effective length of query: 111
Effective length of database: 511
Effective search space: 56721
Effective search space used: 56721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
