CTCACTATATTTAGXXXXXXXXXXXXXXXXXXXXXGGCTGCAGTAATGTT
AGACAGAATCTACATATTCCACTCCTCCTTATAGGCTCTGACAATTTCAC
ACATCCTTTTCTGCAGTGTTCACTGAGCTTTGGAGAGGCTGCAGACATCA
GCCAAGAGGTAATTTATGCAACTTTTAGACAGAATTTGTGGCCACAGTGA
GGGTAGTGTTGCTAAGGCATAAAGTAATTGTGCAATAAGAGCAACAACCA
ATTGTTTTACACTTGAAGACTAAGAAAAGAAGCCAATGACTCAGCATCAT
CCCTCCAGAAACACAATCAGTTGAGATATTAATTTGAAATTAGTGTGACA
TGTGGTTTGTGACATCAGAGATGGCATGCATTTTGTCCTGATAACATACA
ATATAGAGGTGACCAGAAGTGGACTTGAAAACAAGTCATTACTACAGAAT
GTCAGAGTCAATCTGCACCATGTAAGAACAGCACCACTGGCACCTTCCCA
CAGACACCATGATGGAAGGTGCAGAGGATACCACACACTTGCCAAGAGTC
CATGCATCATTCTTGGAATTGACAGTGAAGTGGTACACAGGACCAGGGGC
CACTGTTACACTGAAGAACTATCTTTTTGCACAATCAGTAACAGAACAGA

CATGCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTCACCCGAGGATACCGAAGGCTGAAACTGC
CTGAAAAATGTCCAACATCTTTATCTCNAGAAATGCAATTAAAAACTCTG
GAACTTCCGTCGCCCGGGGAGACGGTTGGGTGAAAAGGTGTTGGGAGCGG
ACAATCTCTAGAAATGGGGGGAAAAAAAAACCCCCCCCTTGTGGGGGGGG
GGAAAGGGGAACCCCCCCTGAAAAAAGGGGGGGGTCCCCCTATATTGGAG
AAAACCCCCGGGGAGGAGCCCCACCCCCCTCCGGGGGATTTTAAAAAAAC
GCCCCCCCCAAAAAAAAAAGGCCCCCCTCTTTTGTTNACCCCTTTTTATT
TATAAAAGGGGAGAGGGAAACACCACCCCCCCCCCAAAAGAGAGAAAAAA
GGGGGGGGGTTTTTTCGGGGGGGCGCCTCTCTTAAAAAAAAAAAAAAATA
ATTTTCTCCCCGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGCGCGAAA
CAAAAAAAAAAAAAAGGGAGGGGGTGGTGGGGGTGGTGGCTCCCCCCCCT
CTTTTTTTTTTTTNNTTTTTTTNTAAAAAAAAAAAAAAAAAAAAAANTTT
TTGAAAGTTGTTTTTTTCTTTTTTTTTTCCGGGCGCGCGGGGGGGAAAAA
AAGGAAGGGGGGAGGGGGCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCC
CCCCCCACAATAAATTTTTGTGTGGGGTGGGGGGGGAGGGGG

Query= MSMg01no500_n23.b1 MSMg01no500_n23.b1 CHROMAT_FILE:
MSMg01no500_n23.b1 PHD_FILE: MSMg01no500_n23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:35 2005
         (543 letters)



>mm_chr18_6647366_6648308
          Length = 943

 Score = 1004 bits (519), Expect = 0.0
 Identities = 537/543 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggctgcagtaatgttagacagaatctacatattccactcctccttataggctctgacaat 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 743 ggctgcagtaatgttagacagaatctacatattccactcctccttataggctttgacaat 684

                                                                       
Query: 61  ttcacacatccttttctgcagtgttcactgagctttggagaggctgcagacatcagccaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct: 683 ttcacacatccttttctgcagtgttcactgagctttggagaggctgcagacatcagctag 624

                                                                       
Query: 121 gaggtaatttatgcaacttttagacagaatttgtggccacagtgagggtagtgttgctaa 180
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gaggtgatttatgcaacttttagacagaatttgtggccacagtgagggtagtgttgctaa 564

                                                                       
Query: 181 ggcataaagtaattgtgcaataagagcaacaaccaattgttttacacttgaagactaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggcataaagtaattgtgcaataagagcaacaaccaattgttttacacttgaagactaaga 504

                                                                       
Query: 241 aaagaagccaatgactcagcatcatccctccagaaacacaatcagttgagatattaattt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aaagaagccaatgactcagcatcatccctccagaaacacaatcagttgagatattaattt 444

                                                                       
Query: 301 gaaattagtgtgacatgtggtttgtgacatcagagatggcatgcattttgtcctgataac 360
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gaaattaatgtgacatgtggtttgtgacatcagagatggcatgcattttgtcctgataac 384

                                                                       
Query: 361 atacaatatagaggtgaccagaagtggacttgaaaacaagtcattactacagaatgtcag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 atacaatatagaggtgaccagaagtggacttgaaaacaagtcattactacagaatgtcag 324

                                                                       
Query: 421 agtcaatctgcaccatgtaagaacagcaccactggcaccttcccacagacaccatgatgg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agtcaatctgcaccatgtaagaacagcaccactggcaccttcccacagacaccatgatgg 264

                                                                       
Query: 481 aaggtgcagaggataccacacacttgccaagagtccatgcatcattcttggaattgacag 540
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aaggtacagaggataccacacacttgccaagagtccatgcatcattcttggaattgacag 204

              
Query: 541 tga 543
           |||
Sbjct: 203 tga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space:   497289
Effective search space used:   497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)