Query= MSMg01no500_o03.b1 MSMg01no500_o03.b1 CHROMAT_FILE:
MSMg01no500_o03.b1 PHD_FILE: MSMg01no500_o03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:36 2005
(372 letters)
>mm_chr18_16434022_16434793
Length = 772
Score = 522 bits (270), Expect = e-152
Identities = 279/282 (98%)
Strand = Plus / Minus
Query: 1 aagaaaaaaaggcatttacgccttgacataatattattctgtcctaccttaaaagaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 aagaaaaaaaggcatttacgccttgacataatattattctgtcctaccttaaaagaaaaa 423
Query: 61 gatatcttgtaaaaaagagctgaacaaaactcatgcaaacaaacaacttcaattttgttt 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 422 gatatcttgtaaaaaagagctgaacaaaactcatgcaaagaaacaacttcaattttgttt 363
Query: 121 ttatctcaactcatattctgagttattaagcaatattagaactattctgcttaagttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttatctcaactcatattctgagttattaagcaatattagaactattctgcttaagttcca 303
Query: 181 aggaagaaaagatctaccataggagcttgtgttcaacatctataggtatgaaagccaaca 240
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 302 aggaagaaaagatctaccataggagcttgtgctcaatatctataggtatgaaagccaaca 243
Query: 241 aaatcactacttttatttaacttcccttagaaattacttcaa 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaatcactacttttatttaacttcccttagaaattacttcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no500_o03.g1 MSMg01no500_o03.g1 CHROMAT_FILE:
MSMg01no500_o03.g1 PHD_FILE: MSMg01no500_o03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:36 2005
(236 letters)
>mm_chr18_16273342_16273977
Length = 636
Score = 441 bits (228), Expect = e-128
Identities = 234/236 (99%), Gaps = 1/236 (0%)
Strand = Plus / Plus
Query: 1 tactttttaaccaggattgttgcccaaatacaaattatttttcatgagctttatgtgtaa 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 202 tactttttaaccaggattgttgcccaaatacaaatt-tttttcatgagctttatgtgtaa 260
Query: 61 ttaatataatcttggtaataatgataaaatattaatattaataatccccatttatggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatataatcttggtaataatgataaaatattaatattaataatccccatttatggaaa 320
Query: 121 atgagtccgaagtatttgatattggtatgtctagtaattgacagtctatattttgtttag 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgagtccgaggtatttgatattggtatgtctagtaattgacagtctatattttgtttag 380
Query: 181 ttttgtaaaatccaaatgtttagccaaaagatgcaacccctatctgaccatcaggt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttgtaaaatccaaatgtttagccaaaagatgcaacccctatctgaccatcaggt 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
