Query= MSMg01no502_j15.b1 MSMg01no502_j15.b1 CHROMAT_FILE:
MSMg01no502_j15.b1 PHD_FILE: MSMg01no502_j15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:41 2005
(199 letters)
>mm_chr18_58151391_58151995
Length = 605
Score = 333 bits (172), Expect = 5e-96
Identities = 180/186 (96%), Gaps = 6/186 (3%)
Strand = Plus / Plus
Query: 1 atgaatacctttgaatgggtgcagtgccatttgctgctggttaaggacc------gggat 54
||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 atgaatacctttgaatgggtgcagtgccatttgctgctggttaaggaccgggattgggat 260
Query: 55 tggagactttgttacacagtggtcagcaggaggttctgtgacagcatcaattgctaagat 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggagactttgttacacagtggtcagcaggaggttctgtgacagcatcaattgctaagat 320
Query: 115 ttaattgcttttctgtttgtggcttttccttcctatctggtgtgtgtgtgtgtgtgtgtg 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaattgcttttctgtttgtggcttttccttcctatctggtgtgtgtgtgtgtgtgtgtg 380
Query: 175 tgtgtg 180
||||||
Sbjct: 381 tgtgtg 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 605
Length adjustment: 8
Effective length of query: 191
Effective length of database: 597
Effective search space: 114027
Effective search space used: 114027
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no502_j15.g1 MSMg01no502_j15.g1 CHROMAT_FILE:
MSMg01no502_j15.g1 PHD_FILE: MSMg01no502_j15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:41 2005
(244 letters)
>mm_chr18_58211615_58212257
Length = 643
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%), Gaps = 1/243 (0%)
Strand = Plus / Minus
Query: 1 aatgaatttattgagaaactactatttgtcactgtgttcagcatagaaagtataatattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aatgaatttattgagaaactactatttgtcactgtgttcagcatagaaagtataatattt 383
Query: 61 tggcaaagtaacttaaaagctactaacttcaataatagttgtttaaattaaatcttgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tggcaaagtaacttaaaagctactaacttcaataatagttgtttaaattaaatcttgaaa 323
Query: 121 catagattaagaagtatttgttaatgaactttgcttgagaagtatatttaaaaagtattt 180
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 322 catagattaagaagtatttgttaatgaactttgcttgagaagtatata-aaaaagtattt 264
Query: 181 cataaataagttgcatagaacatcttgttaatgtgttccttgtgcagttttccatacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cataaataagttgcatagaacatcttgttaatgtgttccttgtgcagttttccatacaac 204
Query: 241 aca 243
|||
Sbjct: 203 aca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 643
Length adjustment: 9
Effective length of query: 235
Effective length of database: 634
Effective search space: 148990
Effective search space used: 148990
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
