NNAACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCATTGGTTTTTCTTTCTTTTTTTTTTTAAGATTTATTTATTT
ATTTCATGTATATGAGTACGCTGTGGCTGTCTTCAGACACACCAGAAGAG
GGCATCAGATCTCATTACAGATGGTTGTGAGCCACCATGTGGTGGCTGGG
AATTGAACTCAGGACCTTTAGAAGAGCAGTCAGTGCTCATAACCACTGAG
CCATCTCTCCAGCCCCCGAATTCATTGTTTTTTTTTTCAAATCTTTTTTT
TTAATTAGGTATTTTCCTCATTTACATTTTCAATGCTATCCCAAAGGTCC
CCCATACCCACCCCCCTAATCCCCTACCCACCCACTCCCCCTTTTTTGGC
CCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGC
CTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGC
TAAAGACAAGAGCTCCCGGGTACTGGTTAGTTCATATTGTTGTTCCACCT
ATAGGGTTGCAGTTCCCTATAGCTCCTTGGGTAATTTCTCTAGCTCCTCC
AATAGAAGCCGTGTGACCCATCCAATAGCTGACTGTGATCATCCACTTCT
GTGTTTGCTAGGCCCCGGCATATTCTCACAGAGAGAGCTATAACTGGGGT
CTTTTCACCAAATCTTGCTAGTGTATGCAATGGTGCATCATTTGGAAGCT
GATTATGGG

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCATTGAGACCGTATTCCTTGACTT
TAATTCTAGTTGTTTTATTATCTAATAGAAGTTCTCCCCCATGACTTTTT
TAGCCTCAAGCATCATGCTATCTCCTGTGCAAAGGGATGGGGTTCTTTGA
AGTAGAATCCTCAACTATTGAATGATACAGGAAGTATCAGCTATATAGAT
TTTCTACCATCACAAAATGCATCATGTTTATTCACTGACTTGCGCCAGTA
AATATAGACATGGGAAGAGGACACATTATTAATTTTGAATCTCAACAGAG
TGTAGTTGAGGATGACTTCCAAGAACATGTTTAGGTTTGTTCTGCCTCTG
CTGTCCTTGTGTCTGTCTGTGATGTCAGTGGGGATGAGTGCCACATTGTC
ACTAGCTGATAAATGCTAATGCAGGATGGAACACATTCCCACCTGGCAGT
CCTTATTTTCCTATATTTACATGTACGGTGAGCTTTTTAAATGAATCTGT
TGGGTTCACAGGCGTCACTCTGCAGCAAGCCACATCTTAGGGTAAACAGC
TAGTCCTCTAGTTTCATGTAAAGGGTCCTTGCTCCCACATTCTCCCATCT
GGTTGCTATGGTGAATGCTAGGTTTTTCTCATTTTTATGGGTTCCCAGAT
ATCTACTGGTTCTGCCACAAGTTTGAAGAGCACCTTCAGTGAATAAAATA
CTAAATCT

Query= MSMg01no508_i12.g1 MSMg01no508_i12.g1 CHROMAT_FILE:
MSMg01no508_i12.g1 PHD_FILE: MSMg01no508_i12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:28 2005
         (543 letters)



>mm_chr18_23538157_23539099
          Length = 943

 Score = 1004 bits (519), Expect = 0.0
 Identities = 537/543 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   cattgagaccgtattccttgactttaattctagttgttttattatctaatagaagttctc 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cattgagactgtattccttgactttaattctagttgttttattatctaatagaagttctc 684

                                                                       
Query: 61  ccccatgacttttttagcctcaagcatcatgctatctcctgtgcaaagggatggggttct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ccccatgacttttttagcctcaagcatcatgctatctcctgtgcaaagggatggggttct 624

                                                                       
Query: 121 ttgaagtagaatcctcaactattgaatgatacaggaagtatcagctatatagattttcta 180
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 623 ttgaagtagaatcctcaactattgaatgatacaggaagtattagctatatagattttcta 564

                                                                       
Query: 181 ccatcacaaaatgcatcatgtttattcactgacttgcgccagtaaatatagacatgggaa 240
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ccatcacagaatgcatcatgtttattcactgacttgcgccagtaaatatagacatgggaa 504

                                                                       
Query: 241 gaggacacattattaattttgaatctcaacagagtgtagttgaggatgacttccaagaac 300
           ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gaggacacactataaattttgaatctcaacagagtgtagttgaggatgacttccaagaac 444

                                                                       
Query: 301 atgtttaggtttgttctgcctctgctgtccttgtgtctgtctgtgatgtcagtggggatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atgtttaggtttgttctgcctctgctgtccttgtgtctgtctgtgatgtcagtggggatg 384

                                                                       
Query: 361 agtgccacattgtcactagctgataaatgctaatgcaggatggaacacattcccacctgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agtgccacattgtcactagctgataaatgctaatgcaggatggaacacattcccacctgg 324

                                                                       
Query: 421 cagtccttattttcctatatttacatgtacggtgagctttttaaatgaatctgttgggtt 480
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 323 cagtccttattttcctatatttacatgtacggtaagctttttaaatgaatctgttgggtt 264

                                                                       
Query: 481 cacaggcgtcactctgcagcaagccacatcttagggtaaacagctagtcctctagtttca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cacaggcgtcactctgcagcaagccacatcttagggtaaacagctagtcctctagtttca 204

              
Query: 541 tgt 543
           |||
Sbjct: 203 tgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space:   497289
Effective search space used:   497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)