Query= MSMg01no510_p03.b1 MSMg01no510_p03.b1 CHROMAT_FILE:
MSMg01no510_p03.b1 PHD_FILE: MSMg01no510_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:39 2005
(406 letters)
>mm_chr18_78205966_78206771
Length = 806
Score = 762 bits (394), Expect = 0.0
Identities = 403/406 (99%)
Strand = Plus / Plus
Query: 1 tctaaccctagcacttgggaggctgaggcggcaggattgtcatgagttttcggctagcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctaaccctagcacttgggaggctgaggcggcaggattgtcatgagttttcggctagcct 260
Query: 61 gggctataagaccatttcaaaaagacaaaaacaaagcaaacaataataggagaaagtctg 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggctataagaccatttcaaaaaaacaaaaacaaagcaaacaataataggagaaagtctg 320
Query: 121 ctgattccttgaattgttgttagtttgaaggcatgaacaagaatgaagctgtaagccagc 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 ctgattccttgaattgttgttagtttgaaggcatgaacaagaatgaagccgtaagccagc 380
Query: 181 agatccatgttctgcagaaagaagtgcggcagctccaagcggaagctgctcagcccccgg 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 agatccatgttctgcagaaagaagtgaggcagctccaagcggaagctgctcagcccccgg 440
Query: 241 cactgaatgttgtggaggccgctgtgcatgcagaaaacctgatcacgtgagtcctgtggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cactgaatgttgtggaggccgctgtgcatgcagaaaacctgatcacgtgagtcctgtggc 500
Query: 301 tgccatttcaaagctggctttgctgtggatggtaatcatgcatgttaccttcctcttccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgccatttcaaagctggctttgctgtggatggtaatcatgcatgttaccttcctcttccc 560
Query: 361 tgcctccctcctccagtcattagtatggaaatcagcaagctagggc 406
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcctccctcctccagtcattagtatggaaatcagcaagctagggc 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_p03.g1 MSMg01no510_p03.g1 CHROMAT_FILE:
MSMg01no510_p03.g1 PHD_FILE: MSMg01no510_p03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:40:39 2005
(553 letters)
>mm_chr18_78328368_78329320
Length = 953
Score = 538 bits (278), Expect = e-157
Identities = 318/338 (94%), Gaps = 14/338 (4%)
Strand = Plus / Minus
Query: 1 cacatctattgctgtaatgtagagctgcagggaatcctaaaagagattttagctacagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cacatctattgctgtaatgtagagctgcagggaatcctaaaagagattttagctacagga 269
Query: 61 ataatatacagagtaagtgtaggatttactccaaggaccgaggattgagatacaaataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ataatatacagagtaagtgtaggatttactccaaggaccgaggattgagatacaaataca 209
Query: 121 aaatagtggccaggcagtggtgtcacatgctgttaatcacagcactcaagagacagaggc 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 208 aaatagtggccaggcagtggtgtcacatgctgttaatcacagcactcaggagacagaggc 149
Query: 181 aagcggatctctgagtttgagtttgagtctagcttggtctctagagtgagttctaggacc 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 148 aagcggatctctgagtttgagtttgagtctagcttggtctatagagtgagttctaggacc 89
Query: 241 tttttt----gtatattcagaaaaagctgggcacaaaagacagatgatagataggtagat 296
| | |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 88 t-----ccagggatattcagaaaaagctgggcacaaaagacagatggtagataggtagat 34
Query: 297 agataagatagatgataggtaatagatagatagataga 334
| ||||||||||||| |||||||||| | ||||||
Sbjct: 33 a----agatagatgatagataatagataggt-gataga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
