Query= MSMg01no511_g13.b1 MSMg01no511_g13.b1 CHROMAT_FILE:
MSMg01no511_g13.b1 PHD_FILE: MSMg01no511_g13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:16 2005
(584 letters)
>mm_chr18_3846473_3847456
Length = 984
Score = 1054 bits (545), Expect = 0.0
Identities = 573/585 (97%), Gaps = 7/585 (1%)
Strand = Plus / Minus
Query: 1 gcaagacagatgtggctcttccattaccttttatctgttgtaattgcccaggacatgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gcaagacagatgtggctcttccattaccttttatctgttgtaattgcccaggacatgtta 599
Query: 61 ccttcagtctccctgaaaaactcacaagctgccaagtggctgtgctctcagggcactggg 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ccttcactctccctgaaaaactcacaagctgccaagtggctgtgctctcagggcactggg 539
Query: 121 actcaaatttcaaccctgcatgtattttattgttttgtttggggaaaaaaagttagaatt 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 actcaaatttcaaccttgcatgtattttattgttttgtttggggaaaaaaagttagaatt 479
Query: 181 caattgaggagcccccgcccctctagagtgggttcatagacttaagaagcaacagcaact 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 478 caattgaggagcccccgcccctctagagtgggttcatagacttaagaagtaacagcaact 419
Query: 241 gctaaaatcccatttgcttcttagcttttaggctgtgcagaaactactgtcttcttagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gctaaaatcccatttgcttcttagcttttaggctgtgcagaaactactgtcttcttagct 359
Query: 301 gtgatacatagacctctctttcactcctgtccctgcaaggcactagctgaaggacttcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gtgatacatagacctctctttcactcctgtccctgcaaggcactagctgaaggacttcac 299
Query: 361 tggtctcagggtctctctgagtccttatttgtactgttgagaaaaaatgacaaatccgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 tggtctcagggtctctctgagtccttatttgtactgttgagaaaaaatgacaaatccgaa 239
Query: 421 aggttgttactagtactaagtaagtttatagtataaacatatatagtat-gcacatagta 479
|||||||||||||||||||||||||||||||||||||| | | | ||||||||||
Sbjct: 238 aggttgttactagtactaagtaagtttatagtataaac-----t-gcctggcacatagta 185
Query: 480 ggtactcagaaaatcttaatcttatttccttcctactcccatctctgtctcacactattc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ggtactcagaaaatcttaatcttatttccttcctactcccatctctgtctcacactattc 125
Query: 540 tttcaagccattgtcctaatctctcctaaagtctgctactcagaa 584
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tttcaagccattgtcctaatctctcctaaagtctgctactcagaa 80
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_g13.g1 MSMg01no511_g13.g1 CHROMAT_FILE:
MSMg01no511_g13.g1 PHD_FILE: MSMg01no511_g13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:16 2005
(554 letters)
>mm_chr18_3683745_3684698
Length = 954
Score = 1056 bits (546), Expect = 0.0
Identities = 552/554 (99%)
Strand = Plus / Plus
Query: 1 catatttcatggctgtgctacttgtgttaagaacaattgagatatctttccagccccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catatttcatggctgtgctacttgtgttaagaacaattgagatatctttccagccccttt 260
Query: 61 gcttcaattttcaaagaaatccttaacctgcaatctggactgaaaagaatgctttgagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcttcaattttcaaagaaatccttaacctgcaatctggactgaaaagaatgctttgagtt 320
Query: 121 cactaatagatttcaatggagccaaccatgctctttggaagttcttctgctgtttacatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cactaatagatttcaatggagccaaccatgctctttggaagttcttctgctgtttacatc 380
Query: 181 agtacaaaattattttggacattgaggaaagacaactgcctggggaaaacacattaggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtacaaaattattttggacattgaggaaagacaactgcctggggaaaacacattaggct 440
Query: 241 tgcaggaaatactaaagtcaaagcccaacatgaaagatggaacctacttcaacatggaaa 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 441 tgcaggaaatactaaagtcaaagcccaacatgaaagatggaacatacttcaacatggaaa 500
Query: 301 caggtgggttcggtgataatcagcaaggtaaacttgggagtctccaagagactgaggatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caggtgggttcggtgataatcagcaaggtaaacttgggagtctccaagagactgaggatg 560
Query: 361 catgccaatcttctaagaagaacacagtgtgggtatgcagaggagagagcttgttattac 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catgccaatcttctaagaagaacacagtgtgggtatgcagaggagagagcttgttattat 620
Query: 421 gtttcctttaaagaacctgacattgaacacattagctaagctaactcaaacgtgctgctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtttcctttaaagaacctgacattgaacacattagctaagctaactcaaacgtgctgctg 680
Query: 481 tgcagttcctacagcgtggccttgcattttttcggctctgtcagggatataattaaagcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgcagttcctacagcgtggccttgcattttttcggctctgtcagggatataattaaagcc 740
Query: 541 agttcattaaacta 554
||||||||||||||
Sbjct: 741 agttcattaaacta 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
