TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCTATTGTTTTTTAACCTTCTTCAACCTTACCACGTCTCCTATCTGGTGG
CACTGTCCACTTGCCTCATACTCAGTCAATTCTACCTTTCAACATTCTTT
CTGGCTTATTGTTTTCCTTACTAACCATGTAATATATGTACACTGTGAAC
GATTTAAGAAACATGGGTCACAATGAAAAATAACCTTAAAAAATATTCAA
CTGTGTTTCTAGCACCTGAGTATGTTTCTTTTTTTTTTTCCTGCGAGTGT
TTTCTCTATTTGCACAGACAAGTGCATTTTAAGTGAGCGCAATGTTTTCT
GATCTACATCTGTACTCAAGGCACTCTGAACACCTTCACTGGACACAACA
TTTGCATTGTGATAGTCTTTAGATCACTCACAGCCCATACCTCTCAGTGA
TGCTATCTCACTGTGTACCAACATCACAGCTGGAACAGCTGTACTTTACA
AATAGAAGGAGTAAATCAATGTGGATTTGAACCACCTTTAGGCTCTGTTA
AGTTCCCTGGGACTGCAATCCTGCCTTCTTTTCTTGTTCCATCCCATCTC
AGTTGCTTCGAGGAGATTGTAGGCTAATGGGAGAATAAAGAGGGCCTCTG
AAGTAAACATGATCACTAGAAATATCTGGAAAATAATGGGGCAAATTATT
ATAGAAAACTTGTTTTTTTTTTCCATCCATTGGCAAATCTGG

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXACCTCCCCTAAGCTTTGTGTCCTTTCTTTTGT
CACAGTAAACCTCTTATTAGGGTTATCGTGGGCTGTTTGATTTTAAAATC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTG
TGTGTGTGTGTGTGTGTGTGTGTGTAGTGAGTGTGAGAGTGAAAATACAC
AAGGCTCTTACTGCGAGTGAGAGAGGCTAGGACAAATGACATGATAAGAT
ATAATACGAGATAGATAAAGTGGAAGTAGACGTGAGAGACATCTCTTTTA
TTTGTTGGAAAGAATAATGAGAGAGAGTGAGCTAATCTGAGTCTTATAAA
TGTGTTTGCTGGGGGGTTGGTGAGAGAGAGATAGGGGGATGGTGGTGTTT
GCAGAAGCTGAGAGGGGGGGTGATGTGTGATGAGCTTTAAGAGGATATTA
ATCCCGTGGGGAGGAGAGAATGTGGTGTAATAAAATTTGATGTGTAGGAA
GAGGATGAGTGTCGGGTGGGGAGGGGAACATCGTAGTAGTATGAAAAAAT
TCCAATTGTAAACGTTGAGGGAAATAGACGGATGTGTGATGAGGGCGGGG
GGGGTTTTAAATATTTGGGAAATGTGAAAAATATACCTTAATAGAGAATG
TTATGTGGATGGGTCTTATAATTTGAGGTAATATAGTGAGGTGAGAGGAG
GGGAGAG

Query= MSMg01no512_j05.b1 MSMg01no512_j05.b1 CHROMAT_FILE:
MSMg01no512_j05.b1 PHD_FILE: MSMg01no512_j05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:42:47 2005
         (570 letters)



>mm_chr18_43832173_43833143
          Length = 971

 Score =  951 bits (492), Expect = 0.0
 Identities = 550/576 (95%), Gaps = 15/576 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccta----ttgttttttaaccttcttcaaccttacca-cgtctcctatctggtgg 59
           |||||||||    || |||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 201 gaattcctagagttttttttttaaccttcttcaaccttaccatc-tctcctatctggtgg 259

                                                                       
Query: 60  cactgtccacttgcctcatactcagtcaattctacctttcaacattctttctggcttatt 119
           |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 260 cactgtccacttgcctcacactcagtcaaatctacctttcaacattctttctggcttatt 319

                                                                       
Query: 120 gttttccttactaaccatgtaatatatgtacactgtgaacgatttaagaaacatgggtca 179
            ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct: 320 ctttcccttactaaccatgtaatatatgtacactgtgaatgatttaagaaacatgggcca 379

                                                                       
Query: 180 caatgaaaaataaccttaaaaaatattcaactgtgtttctagcacctgagtatgtttctt 239
           |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||  
Sbjct: 380 caataaaaaataaccttaaaaaatattcaaccgtgtttctagcacctgagtatgtttc-- 437

                                                                       
Query: 240 ttttttttt-----cctgcgagtgttttctctatttgcacagacaagtgcattttaagtg 294
             |||||||     ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 438 --ttttttttttttcctgcgagtgttttctctatttgtacagacaagtgcattttaagtg 495

                                                                       
Query: 295 agcgcaatgttttctgatctacatctgtactcaaggcactctgaacaccttcactggaca 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agcgcaatgttttctgatctacatctgtactcaaggcactctgaacaccttcactggaca 555

                                                                       
Query: 355 caacatttgcattgtgatagtctttagatcactcacagcccatacctctcagtgatgcta 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 caacatttgcattgtgatagtctttagatcactcacagcccatacctctcagtgatgcta 615

                                                                       
Query: 415 tctcactgtgtaccaacatcacagctggaacagctgtactttacaaatagaaggagtaaa 474
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tctcactgtgtaccaacatcacagctggaacagctgtactttacaaatagaaggagtaaa 675

                                                                       
Query: 475 tcaatgtggatttgaaccacctttaggctctgttaagttccctgggactgcaatcctgcc 534
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tcaatgtggatttgaaccatctttaggctctgttaagttccctgggactgcaatcctgcc 735

                                               
Query: 535 ttcttttcttgttccatcccatctcagttgcttcga 570
           ||||||||||||||||||||||||||||||||||||
Sbjct: 736 ttcttttcttgttccatcccatctcagttgcttcga 771


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 971
Length adjustment: 10
Effective length of query: 560
Effective length of database: 961
Effective search space:   538160
Effective search space used:   538160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)