Query= MSMg01no518_a05.b1 MSMg01no518_a05.b1 CHROMAT_FILE:
MSMg01no518_a05.b1 PHD_FILE: MSMg01no518_a05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:18 2005
(634 letters)
>mm_chr18_22522771_22523804
Length = 1034
Score = 1166 bits (603), Expect = 0.0
Identities = 622/631 (98%), Gaps = 6/631 (0%)
Strand = Plus / Plus
Query: 4 ggaattccagttctgggagatccaatggctttgggcttcctcgggcattgcatgtaaagt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattccagttctgggagatccaatggctttgggcttcctcgggcattgcatgtaaagt 265
Query: 64 gatacacccattcacttaaaataaaaaaaaaaatctttaaaatatattcagaagtcagag 123
| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggtacacccattcacttaaaat--aaaaaaaaatctttaaaatatattcagaagtcagag 323
Query: 124 aagaccatgcatctctgctttccttggtagtattagttaatgcagggtatttttatgtag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aagaccatgcatctctgctttccttggtagtattagttaatgcagggtatttttatgtag 383
Query: 184 catcaatatagacttgatttatgggtatgtgcatgtgaacactataaatatttggatgtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 catcaatatagacttgatttatgggtatgtgcatgtgaacactataaatatttggatgtt 443
Query: 244 tgtctgaatgcttatttgtgttgaggccagagattaacattgattagcttccttagttac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgtctgaatgcttatttgtgttgaggccagagattaacattgattagcttccttagttac 503
Query: 304 tctctattttattttttgatgtaaagttcggtttgattttctgttgctgtgataaaacag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tctctattttattttttgatgtaaagttcggtttgattttctgttgctgtgataaaacag 563
Query: 364 ccttgccaaaagcaacttagtggagagaagggtttacttcagcttacactcctaggtcac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccttgccaaaagcaacttagtggagagaagggtttacttcagcttacactcctaggtcac 623
Query: 424 agtccagtgttgagggatgcagggcaggaacttgtagaagaagccatagagcaatgctgc 483
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 624 agtccagtgttgagggatgcagggcaggaacttgtagaagaagccatagaacagtgctgc 683
Query: 484 ttgcttactgagtcattctgagctagcttatagcccagacatacctgtcaccagatagtg 543
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttgcttact----cattctgagctagcttatagcccagacatacctgtcaccagatagtg 739
Query: 544 ccaatgatagtcattcggacatttccacatcaccagtccagacaatctctcccagatatg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccaatgatagtcattcggacatttccacatcaccagtccagacaatctctcccagatatg 799
Query: 604 gccattggccagtctgtgacatggccattgg 634
|||||||||||||||||||||||||||||||
Sbjct: 800 gccattggccagtctgtgacatggccattgg 830
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_a05.g1 MSMg01no518_a05.g1 CHROMAT_FILE:
MSMg01no518_a05.g1 PHD_FILE: MSMg01no518_a05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:18 2005
(651 letters)
>mm_chr18_22684670_22685720
Length = 1051
Score = 1187 bits (614), Expect = 0.0
Identities = 642/654 (98%), Gaps = 6/654 (0%)
Strand = Plus / Minus
Query: 1 ttttaattctataggcacaaccaataggctaatggcactgcgttttgtgctctgaaactg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 851 ttttaattctataggcacaaccaataggctaatggcactgtgttttgtgctctgaaactg 792
Query: 61 gagttaaatgggtgcacttctccttcctttcatcttccagttgtgagcctgtgcttttga 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 791 gagttaaatgggtgcacttctccttcctttcatcttcca---gtgagcctgtgcttttga 735
Query: 121 gcttgctcttgggaaccaagcctctcctcaagcacagctgtctctggactgcaaggagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gcttgctcttgggaaccaagcctctcctcaagcacagctgtctctggactgcaaggagtc 675
Query: 181 agcatatgggaggagcttaaatcctcagcttttactggatgaacttcagagggaactgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 agcatatgggaggagcttaaatcctcagcttttactggatgaacttcagagggaactgtg 615
Query: 241 agagatgcaatatcccctttccagtcccactctcttaggtatgaggcatgaaacagcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 agagatgcaatatcccctttccagtcccactctcttaggtatgaggcatgaaacagcaac 555
Query: 301 acatgcaggagggagcac---ttttttttttaaataagagttatttcagagtcaaagaca 357
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 554 acatgcaggagggagcacttttttttttttttaataagagttatttcagagtcaaagaca 495
Query: 358 actgtatagattgtgaatcaagagagaataaatggttctgaaaaaggtcaccattcatac 417
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 494 actgtatagattgtgaatcaagagagactaaatggttctgaaaaaggtcaccattcatac 435
Query: 418 tgccttctgcagtcactgtcatatatgacacctgtgaaaagaggtggccagtctctggaa 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tgccttctgcagtcactgtcatatatgacacctgtgaaaagaggtggccagtctctggaa 375
Query: 478 aggccagggcaccctggcatgactgagggctacatccactccacgtgtacccaatttcca 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 374 aggccagggcaccctggcatgactgagggctacatccactccacgtgtacccaatttcta 315
Query: 538 tgtggtatttggaacagagtgagtagaatggctaatattctatctcatcagctcacaata 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tgtggtatttggaacagagtgagtagaatggctaatattctatctcatcagctcacaata 255
Query: 598 atgaatgtacagcattttattgtttgcttttaatattaggtagggcacagattt 651
||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atgcatgcacagcattttattgtttgcttttaatattaggtagggcacagattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
