CCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACTGCAGAATGAATCCTGATGATAGCCATTGGAATGTTTGGCTCC
AGAAAAGGTCAGCATTTGCCATAGTGAGAAAACTGAATAGGAACATCACT
TTTCCTGTAGAATCCAAAGGGGAAAAACCATTCAAAATTAATCACACGTT
CGGATAATTTATATGCTTATATACTTATAAGAGGATTTTTACTCTGGACA
TGCTAGAGAGATTATGCTTTATTCTTAAAGCAGCTGTGTCCACTTGCTTC
TTGGGTCCCTGTATACCCTTTCTATACTGTGGGGATCCTTGGCAATTCCA
ACTTTCTCAGTCAAAACTCACATCAGATCCATGAAAAAAGAGCTATGGGT
AATTGCAGCTCTGCCAAGAGGTACATACCACTTTGGAAGCAAACGGGCAG
CTAAGAGAAGAAAGCCACATAAGGAAATGAGGAATAAAGGAGGCCATCGA
GCCTTCAAACCACAATGTCTTTCAGACTGAAGGAGAGCGATACAGAGACA
GAGAGACACAGAGACAAGTGTTCAGTTGAGAGTGCCTGTGCTCTCGGGGG
GGGGGGGTTTAGAAAGACGACTTCCAGAGACAACCCGACATTACACGAGT
TTCTTTTTTAGCATTAACTAGCTCATTATCCACAGTGAATTTTAAAGCTC
AGCGTTCAATCCTATTCCTGGTCAGTTATGTAGCTAGAATGCTGCGAGAT
GGACTCTCA

ACAATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACGACTGTCTGGATTGCTGTGCA
AGGGGTTGGATGGGTTGGGTTGGGCTGGGTTGGGTTGACTCCACTCGCCC
CGCCCCCCCCCACCACACCCACCAACAAAACAACAAGACCACCCCAAACC
AAACACCATCACCCACACCCACACAACCCAACACCCACACACCCCCACTC
CCAACACCAACACAACACCCCCCCAAAACCCACACCCACCCAACACCCCC
AAAACCAATCCCACCCAACCCCCCCCCAACCACAACAACCACCACCCCCC
AAACCCACCCACCCCCCCAACCCAACACACAAACCCTAACACCCCCCCCC
ACACCACCCCCCCCGACCCTCCACACCCCGCCAACACACCACCACCACAC
ACCAACCCACCCCACACCCACCCACACAACACCCCCCCACCTCTCCAAAA
AACCACACCCCACACCCAACCACCACCACACTCTCCCACCACCCACCACA
ACCACCACTCACCAGCCCCCACCCACCCACCCACCGCCGAGCACAACCCC
ACCTCACAAACCAAACACACACACACACACACAACACACCCAACCAACCC
ACACCTCCACTAAAACAACACAAACCCCACCACCCACCAACACAACACAC
CCCCCCCAACCCCCCCCCCTCCCACCTCCCCATACACACAACCCCCAACC
CTCCCACTAATCACCACCCCAATAACCAACCCCTCCCCCTCACAACCAAC
CCACAACACACAACACACCACCACACACAAACCCCCACACCACCCCACCC
ACACCACCACCGCCACCCAACCCACAACACAAACAACCCCACCACCG

Query= MSMg01no520_n12.b1 MSMg01no520_n12.b1 CHROMAT_FILE:
MSMg01no520_n12.b1 PHD_FILE: MSMg01no520_n12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:00 2005
         (714 letters)



>mm_chr18_62813298_62814426
          Length = 1129

 Score = 1234 bits (638), Expect = 0.0
 Identities = 699/726 (96%), Gaps = 17/726 (2%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcactgcagaatga-atcctgatgatagccattggaatgtttggctccagaaaagg 63
           ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 929 gaattcactgcagaaagatatcctgatgatagccattggaatgtttggctccagaaaatg 870

                                                                       
Query: 64  tcagcatttgccatagtgagaaaactgaataggaacatcacttttcctgtagaatccaaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 tcagcatttgccatagtgagaaaactgaataggaacatcacttttcctgtagaatccaaa 810

                                                                       
Query: 124 ggggaaaaa-ccattcaaaattaatcacacgttcggataatttatatgcttatatactta 182
            |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 809 -gggaaaaacccattcaaaattaatcacacgtttggataatttatatgcttatatactta 751

                                                                       
Query: 183 ta--agaggatttttactctggacatgctagagagattatgctttattcttaaagcagct 240
           ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 taagagaggatttttactctggacatgctagagagattatgctttattcttaaagcagct 691

                                                                       
Query: 241 gtgtccacttgcttcttgggtccctgtataccctttctatactgtggggatccttggcaa 300
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 690 gtgtccacttgcttcttgggtccctgtataccctttctacactgtggggatccttggcaa 631

                                                                       
Query: 301 ttccaactttctcagtcaaaactcacatcagatccatgaaaaaagagctatgggtaattg 360
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 630 ttccaactttctcagtcaaaactcacatcagatccatgaaagaagagctatgggtaattg 571

                                                                       
Query: 361 cagctctgccaagaggtacataccactttggaagcaaacgggcagc------taagagaa 414
           ||||||||| |||||||||||||||||| |||||||||||||||||      |||||| |
Sbjct: 570 cagctctgctaagaggtacataccacttcggaagcaaacgggcagccatttataagagta 511

                                                                       
Query: 415 gaaagccacataaggaaatgaggaataaaggaggccatcgagccttcaaaccacaatgtc 474
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 510 gaaagccacataaggaaatgaggaataaaggaggccatcgagccttcaaaccacaaagtc 451

                                                                       
Query: 475 tttcagactgaaggagagcgatacagagacagagagacacagagacaagtgttcagttga 534
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tttcagactgaaggagagcgagacagagacagagagacacagagacaagtgttcagttga 391

                                                                       
Query: 535 gagtgcctgtgctctcgggggg----ggggggt--ttagaaagacgacttccagagacaa 588
           ||||||||||||||||||||||    |||||||  |||||||||||||||||||||||||
Sbjct: 390 gagtgcctgtgctctcggggggcgtgggggggtgtttagaaagacgacttccagagacaa 331

                                                                       
Query: 589 cccgacattacacgagtttcttttttagcattaactagctcattatccacagtgaatttt 648
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cccgacattacacgagtttcttttttagcattaactagctcattatccacagtgaatttt 271

                                                                       
Query: 649 aaagctcagcgttcaatcctattcctggtcagttatgtagctagaatgctgcgagatgga 708
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aaagctcagcgttcaatcctattcctggtcagttatgtagctagaatgctgcgagatgga 211

                 
Query: 709 ctctca 714
           ||||||
Sbjct: 210 ctctca 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 714
Length of database: 1129
Length adjustment: 10
Effective length of query: 704
Effective length of database: 1119
Effective search space:   787776
Effective search space used:   787776
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)