Query= MSMg01no520_o10.b1 MSMg01no520_o10.b1 CHROMAT_FILE:
MSMg01no520_o10.b1 PHD_FILE: MSMg01no520_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:04 2005
(605 letters)
>mm_chr18_70877687_70878694
Length = 1008
Score = 1087 bits (562), Expect = 0.0
Identities = 596/608 (98%), Gaps = 3/608 (0%)
Strand = Plus / Minus
Query: 1 actgttgtacttatgttataatctcaaaacataaaagataataactattttagaagattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 actgttgtacttatgttataatctcaaaacataaaagataataactattttagaagattc 665
Query: 61 aataagcaaagtcaaaaaacattgca-aaaactctcaacaaactaataaaaaaatgaaat 119
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 664 aataagcaaagtcaaaaaacattgcacaaaactctcaacaaactaataaaaaaatgaaat 605
Query: 120 tttttgaaaagctgaagtcctgtatcttttcattcattttaaaatatgattccttaattt 179
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 604 tttttgaaaagctgaagtcctgtgtcttttcattcattttaaaatatgattccttaattt 545
Query: 180 agagaaatggtagttatgacccatttaaataattccctggaaagaagagggggattacaa 239
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aaagaaatggtagttatgaaccatttaaataattccctggaaagaagagggggattacaa 485
Query: 240 g--aaaaaaaaagagccagcccagtacatagagccatcaatacctgcttctatgtggaac 297
| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gaaaaaaaaaaagagtcagcccagtacatagagccatcaatacctgcttctatgtggaac 425
Query: 298 aaacattcaaattttgtgctgtaaagtatacacgttccaaattggagaactccaatctgt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aaacattcaaattttgtgctgtaaagtatacacgttccaaattggagaactccaatctgt 365
Query: 358 cctcatcttttgaatattctgagatggtcacaaaatggttagttgatcattagctatgat 417
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 364 cctcatcttttgaatattctgagatggtcacaaaatggttcgttgatcattagctatgat 305
Query: 418 gtgtatgactggttcaatagctgaacgccatctgtttagaaagtccccacaggtttttgt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 304 gtgtatgactggttcaatagctgaacgccatctgtttagaaagtccccacaggttttcgt 245
Query: 478 tactcagccttgtgatccctagaggcctccagtataactttagaggtttgagtgaaaatg 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tactcagccttgtgatccctagaggcctccagtataactttagaggtttgagtgaaaatg 185
Query: 538 gacccatagggttgtatatttaatgtcccatttgtttggttcccagttggtgggctactt 597
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 184 gacccataggattgtatatttaatgtcccatttgtttcgttcccagttggtgggctactt 125
Query: 598 gggaagga 605
||| ||||
Sbjct: 124 ggggagga 117
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1008
Length adjustment: 10
Effective length of query: 595
Effective length of database: 998
Effective search space: 593810
Effective search space used: 593810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no520_o10.g1 MSMg01no520_o10.g1 CHROMAT_FILE:
MSMg01no520_o10.g1 PHD_FILE: MSMg01no520_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:04 2005
(647 letters)
>mm_chr18_70704058_70705104
Length = 1047
Score = 1207 bits (624), Expect = 0.0
Identities = 641/647 (99%)
Strand = Plus / Plus
Query: 1 ctgagctttgatgacttatttagtagtaattatttcagtcctgggactgaataccagtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgagctttgatgacttatttagtagtaattatttcagtcctgggactgaataccagtgt 260
Query: 61 gttgtatctgttctacctctgagcttcacacccaggctgagaatcggaaacgtagacaga 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 gttgtatctgttctacctctgagcttcacacccaggctgagaatcagaaacgtagacaga 320
Query: 121 tgccacataagcacataagacacactgtggtctcaaattatttttttatgttcctgtatg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 tgccacataagcacataagacacactgtggtctcaaattatttttttatgtttgtgtatg 380
Query: 181 cgcctgcaggtctttgtgtctgaggtcagagaacaacttccggtgtcagtgtctgagact 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcctgcaggtctttgtgtctgaggtcagagaacaacttccggtgtcagtgtctgagact 440
Query: 241 ggatttcttgttcaccactgcatgtggtaggccagctggcccgtgaacttctttcttggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggatttcttgttcaccactgcatgtggtaggccagctggcccgtgaacttctttcttggt 500
Query: 301 attccaggctcccactcccatcttaccctttgagctatgggattagagagatgctgctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attccaggctcccactcccatcttaccctttgagctatgggattagagagatgctgctgt 560
Query: 361 gtcccgcttttggtgggttctgggggcttgaactcaagaccttgcacgtgtacggtaagg 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 gtcccgcttttggtgggttctgggggcttgaactcaagaccttgcacttgtacggtaagg 620
Query: 421 taagtgttttaccggctgagccatctccccaagccttgttctcatagttcanaactcaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 taagtgttttaccggctgagccatctccccaagccttgttctcatagttcaaaactcaat 680
Query: 481 ttaagaataaagcctctgctacttttggaggtgtttttggtgcatcggaaagagtgtgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaagaataaagcctctgctacttttggaggtgtttttggtgcatcggaaagagtgtgaa 740
Query: 541 ctttgctgttagaaaagcttcatatttctccactgaacaattattcaacctcaccgtttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctttgctgttagaaaagcttcatatttctccactgaacaattattcaacctcaccgtttt 800
Query: 601 ctgtttcgaaagatgatagtcgtaactttcgaattcattgtgacgat 647
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctgtttcgaaagatgatagtcgtaactttcgaattcattgtgacgat 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
