Query= MSMg01no522_g21.b1 MSMg01no522_g21.b1 CHROMAT_FILE:
MSMg01no522_g21.b1 PHD_FILE: MSMg01no522_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:02 2005
(599 letters)
>mm_chr18_49516126_49517124
Length = 999
Score = 1120 bits (579), Expect = 0.0
Identities = 591/595 (99%)
Strand = Plus / Plus
Query: 5 gaattctcccctcttcttgggctctgcttggcttgagtctgttgaaaatgtactactctg 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 205 gaattctcccctcttcttgggctctgcttggcttgagtctgttgaaaatgtactgctctg 264
Query: 65 ttcacgtctgtgtttgtatatttgacaatccttttagatatgcctcagtctaaccttaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcacgtctgtgtttgtatatttgacaatccttttagatatgcctcagtctaaccttaaa 324
Query: 125 ctcactatgtagccaaggatgattttgaacttctggtcctcctgcctctaccttgtgtgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 325 ctcactatgtagccaaggatgattttgaacttctggtcctcctgcctctacctcgtgtgc 384
Query: 185 gctgaaatcattgacatgcaccactcactctgccctgtttatagagaactgggaatcaaa 244
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctgaaatcatcgacatgcaccactcactctgccctgtttatagagaactgggaatcaaa 444
Query: 245 tcgaggcttcatatgtgcttggcaagaactagaactgcatccccatgccctgcttcagat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcgaggcttcatatgtgcttggcaagaactagaactgcatccccatgccctgcttcagat 504
Query: 305 caagtactgtattaaaagcagatgcaatataaaaagaccaagctaaataactgtggttca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 caagtactgtattaaaagcagatgcaatataaaaagaccaagctaaataactgtggttca 564
Query: 365 acactacatatcagctagattgcatgctgttaaaacatgatgtaggaattcaatttctgc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acactacatatcagctagattgcatgctgttaaaacatgatgtaggaattcaatttctgc 624
Query: 425 cttggaacccagcctccatgcctggccactgggtcgctgttcttgttcttctcctccatt 484
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 625 cttggaacccagcctccatgcctggccactaggtcgctgttcttgttcttctcctccatt 684
Query: 485 gaaatcctctagagctacactcttaccagatcataaacccttgtaatgcagcctcaattt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gaaatcctctagagctacactcttaccagatcataaacccttgtaatgcagcctcaattt 744
Query: 545 ctacatgtgtacttagggcaaatttatgctcatcactcccaaataagcattccat 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctacatgtgtacttagggcaaatttatgctcatcactcccaaataagcattccat 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_g21.g1 MSMg01no522_g21.g1 CHROMAT_FILE:
MSMg01no522_g21.g1 PHD_FILE: MSMg01no522_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:02 2005
(549 letters)
>mm_chr18_49673272_49674218
Length = 947
Score = 1042 bits (539), Expect = 0.0
Identities = 546/549 (99%), Gaps = 2/549 (0%)
Strand = Plus / Minus
Query: 1 aattttgattttgttttaaatatctttctttttggcttttatttttacatgacttcatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 aattttgattttgttttaaatatctttctttttggcttttatttttacatgacttcatga 688
Query: 61 gtgccttttaaagttttttttttaatgtaggatgaatagcgtttaaattttatttcatta 120
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gtgccttttaaag--ttttttttaatgtaggatgaatagcgtttaaattttatttcatta 630
Query: 121 aaaactgttagtttattattaacaaaagcctgtgtatacaatcattttgccatgcctaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aaaactgttagtttattattaacaaaagcctgtgtatacaatcattttgccatgcctaaa 570
Query: 181 cttaccacattccgaacggtccctaattacaacagttattgtgttgtggtgttctctaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 cttaccacattccgaacggtccctaattacaacagttattgtgttgtggtgttctctaga 510
Query: 241 ggtcattacagaggtattagacaagataagagctggcaggttctgaggggacatttcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ggtcattacagaggtattagacaagataagagctggcaggttctgaggggacatttcctt 450
Query: 301 attagaatgagcatctctaacaagtactgtcatataccaagacagattaatataaaactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 attagaatgagcatctctaacaagtactgtcatataccaagacagattaatataaaactt 390
Query: 361 tcaggcagtaacatgtatttggagattaacttcaaccctcgccttaaggaataaaaacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tcaggcagtaacatgtatttggagattaacttcaaccctcgccttaaggaataaaaacaa 330
Query: 421 atctattaatgtatttaagcaaaactaccttgatggccacaacaaaatgtttctctgtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atctattaatgtatttaagcaaaactaccttgatggccacaacaaaatgtttctctgtga 270
Query: 481 gtcaatctgcagtagctgaaggtgtgtagggttttgtcctactccccttacatcactccg 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 269 gtcaatctgcagtagctgaaggtgtgtagggttttgtcctactccccttacatcactctg 210
Query: 541 catctccgt 549
|||||||||
Sbjct: 209 catctccgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 947
Length adjustment: 10
Effective length of query: 539
Effective length of database: 937
Effective search space: 505043
Effective search space used: 505043
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
