NAACCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCATATCAACCCTTAACATGACATAGAACTTGCACTGTACAAGA
TTGGGTCCAAATTCTTCCACAGAATTTTGCCTTTAAAAATTCCAGAGATA
ATTTCCCTTGGTGACAAACTACATGGTCCAACAGCACCTCATGTCACAGT
TTTTGTATAACTGCTTGGATTCTCTGCAATCAATCTAATTCCCTCTTGAC
ATTGTGTCTTGACACCAGGGCTGCCTGTATAAAAGATAGTTTATTCTAGA
ACTAAATATGAGAGTCCATGGCCCAGGAACTCAGGTCACCCCCAAATACC
ATGTTCCAATGTGATAGCAGCTTCAATACTTATTCATGCTATTTTTAATT
TTATACAATATATTTCAATCATATTCTTTCCCCCCACACCAACTCCTTCC
AGATTCTCTCCACTTAGTAATAAAGGAGCGGGAAGTGATGAATTCAGGCA
CTTTTTAAATGCATTGGCAGAAACATTAGGCACACAAGCAACAGCAAAGT
AGAGAGGTCTGTGCTGGAAGTCTCGTGCTAGCTGACAACATTCTGAGCCT
TTCTTTTGGCCACAAATTTTGGGAGAGCCCCTTCATGGTCGCCAGATAAT
ACTGAGAAAATTGGGATCCCCTGTTGGAATTCTAACTCTCACTAATAAAA
TTTAAGAATGGCCACAAATATTAGTCGAAAGGGAACTCTTATTCAAGTAA
AAAAAATA

NACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXATTTGGGAGAAATGAGCTTCCC
AGTTCCACAGACCTTCTGGTCCAAGAGGCCCTGGAGCAGTGGCTTTTCTG
CAAAATGTGGGGTCTTACTTAGTGAAGGAGATTTCTCCAGAAACGTTCCG
TCACGAAGGTGAGTGGAAGGGGGGAGATGTCATGGAGGACCGAAGCCAGA
ACAACTCCTGAAAGGCTTCTTTTCTATTCTCGTTTCATACTCTAAAACCA
CAAGGTGGGTTTTAGAGAAGCCCATGTGCTGTTAAAGGCAGTGACCCATG
GTTCAGCAGTTTCTCTGGGTCGTTTTGTTCCAGGTGGCAAGTGAAGTTAT
GCTTAGCAAATAGACAGTACAACCACTGCTTTAAGTAAATCACTGAAAAA
GAAAATCAGTATCTAAGTTTCTTACTGGTCTTTTTTCCTTTATTCAATCA
CAACCATTCTCTGATTGGGTTTGAGGCCGCTCTGCGGGAGGGAATTCACA
TCTGGGACCTGCAAAGTCAGCCAAAGAAACCCTATTACTGGGCAGTGCGG
AATCCCTACAGGAGAACGGAGTTTTGGTTACCTAAATTGATACAGCATCA
ACTGCCTTGTAAACATATTTCTATTCATAAACAAAGGCCTTAACCAGAGG
AGCTTCTCTGTGCAGTCAAGCGCTTCACCTTGGTTAATGGTTCTAACCCA
GCTGGCAACAATGTAAT

Query= MSMg01no522_p06.b1 MSMg01no522_p06.b1 CHROMAT_FILE:
MSMg01no522_p06.b1 PHD_FILE: MSMg01no522_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:42 2005
         (658 letters)



>mm_chr18_68182050_68183107
          Length = 1058

 Score = 1002 bits (518), Expect = 0.0
 Identities = 527/530 (99%)
 Strand = Plus / Minus

                                                                        
Query: 129  gtccaacagcacctcatgtcacagtttttgtataactgcttggattctctgcaatcaatc 188
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 gtccaacagcacctcatgtcacagtttttgtataactgcttggattctctgcaatcaatc 999

                                                                        
Query: 189  taattccctcttgacattgtgtcttgacaccagggctgcctgtataaaagatagtttatt 248
            | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 998  tgattccctcttgacattgtgtcttgacaccagggctgcctgtataaaagatggtttatt 939

                                                                        
Query: 249  ctagaactaaatatgagagtccatggcccaggaactcaggtcacccccaaataccatgtt 308
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938  ctagaactaaatatgagagtccatggcccaggaactcaggtcacccccaaataccatgtt 879

                                                                        
Query: 309  ccaatgtgatagcagcttcaatacttattcatgctatttttaattttatacaatatattt 368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878  ccaatgtgatagcagcttcaatacttattcatgctatttttaattttatacaatatattt 819

                                                                        
Query: 369  caatcatattctttccccccacaccaactccttccagattctctccacttagtaataaag 428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818  caatcatattctttccccccacaccaactccttccagattctctccacttagtaataaag 759

                                                                        
Query: 429  gagcgggaagtgatgaattcaggcactttttaaatgcattggcagaaacattaggcacac 488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758  gagcgggaagtgatgaattcaggcactttttaaatgcattggcagaaacattaggcacac 699

                                                                        
Query: 489  aagcaacagcaaagtagagaggtctgtgctggaagtctcgtgctagctgacaacattctg 548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698  aagcaacagcaaagtagagaggtctgtgctggaagtctcgtgctagctgacaacattctg 639

                                                                        
Query: 549  agcctttcttttggccacaaattttgggagagccccttcatggtcgccagataatactga 608
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 638  agcctttcttttggccacaaattttgggagagtcccttcatggtcgccagataatactga 579

                                                              
Query: 609  gaaaattgggatcccctgttggaattctaactctcactaataaaatttaa 658
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578  gaaaattgggatcccctgttggaattctaactctcactaataaaatttaa 529


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space:   679104
Effective search space used:   679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)