Query= MSMg01no523_m10.b1 MSMg01no523_m10.b1 CHROMAT_FILE:
MSMg01no523_m10.b1 PHD_FILE: MSMg01no523_m10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:48 2005
(354 letters)
>mm_chr18_75823491_75824243
Length = 753
Score = 636 bits (329), Expect = 0.0
Identities = 347/353 (98%), Gaps = 1/353 (0%)
Strand = Plus / Minus
Query: 1 gaggtagaggctgctgagaaatgttcactcggaagcctactggccaccatcctttaatag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 552 gaggtagaggctgctgagaaatgctcactcggaagcctactggccaccatcctttaatag 493
Query: 61 gcacatccttgggaccttaatgttcatcgtacctgataccgactgtattctgtgtgtcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gcacatccttgggaccttaatgttcatcgtacctgataccgactgtattctgtgtgtcct 433
Query: 121 gaatcaggcctaaggaaagttaaggtcttgaccttgacctgcctttatagaccctctcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 432 gaatcaggcctaaggaaagttaaggtcttgaccttgacctgcctttataga-cctctcta 374
Query: 181 ctgtgtgtgacctttatggttccctggggatttctatgcttcccctctggctctgtctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 373 ctgtgtgtgacctttatggttccctggggatttctatgcttcccctctgactctgtctgt 314
Query: 241 ctcagtatgccaggtaccttcttgcttcataggaattttgttaagctgtctgtccttctg 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctcagtatgccaagtaccttcttgcttcataggaattttgttaagctgtctgtccttctg 254
Query: 301 ccctgtagtctggtttctgtgcccactccttacctaaagtactgggcccaggg 353
||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 253 ccctgaagtctggtttctttgcccactccttacctaaagtactgggcccaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 753
Length adjustment: 9
Effective length of query: 345
Effective length of database: 744
Effective search space: 256680
Effective search space used: 256680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_m10.g1 MSMg01no523_m10.g1 CHROMAT_FILE:
MSMg01no523_m10.g1 PHD_FILE: MSMg01no523_m10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:48 2005
(464 letters)
>mm_chr18_75672744_75673607
Length = 864
Score = 866 bits (448), Expect = 0.0
Identities = 460/464 (99%)
Strand = Plus / Plus
Query: 1 tgcacttctctcctgggcatgcccagccaagccagcactaatattggtttacatgcttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcacttctctcctgggcatgcccagccaagccagcactaatattggtttacatgcttgc 260
Query: 61 aatgcacatgggctccatggaaggtgtggcagcaagcagggagggaggcagagggacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgcacatgggctccatggaaggtgtggcagcaagcagggagggaggcagagggacaga 320
Query: 121 gtgtaaggaggtgacatggactggggtacaaaggagtgttcttttaggcagctctgtcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtaaggaggtgacatggactggggtacaaaggagtgttcttttaggcagctctgtcct 380
Query: 181 accaaagtctgaggggcagaggcaatcatgcccttccccggggtgttctttacagtcccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accaaagtctgaggggcagaggcaatcatgcccttccccggggtgttctttacagtcccc 440
Query: 241 atagatggcttcatagaatggctatttctaagctcccaatctttgtcctatttgggtaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atagatggcttcatagaatggctatttctaagctcccaatctttgtcctatttgggtaat 500
Query: 301 gggatgggagttaggagtccagacagttagagctgtggcttttgctaaactactttctct 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggatgggagctaggagtccagacagttagagctgtggcttttgctaaactactttctct 560
Query: 361 gtctttctgtctctctcgatatggggaacccatctgagaatcacacacaggaatgggctt 420
|||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 gtctttctctctctttcgatatggggaacccatctaagaatcacacacaggaatgggctt 620
Query: 421 ctgtcccgcaaagcactggggtcccaaactcaatgctctaccac 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgtcccgcaaagcactggggtcccaaactcaatgctctaccac 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
