Query= MSMg01no523_p24.b1 MSMg01no523_p24.b1 CHROMAT_FILE:
MSMg01no523_p24.b1 PHD_FILE: MSMg01no523_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:07 2005
(602 letters)
>mm_chr18_88720668_88721669
Length = 1002
Score = 1079 bits (558), Expect = 0.0
Identities = 588/598 (98%)
Strand = Plus / Minus
Query: 5 gaattcaccttcttttgcttctttgtgctatttggcctttagcagatacatgtgggtgaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 997 gaattcaccttcttttgcttctttgtgctatttggcctttagcagatacatatgggtgaa 938
Query: 65 ggtaaatctcttatttacctagtctattgatgctaatctaattcaaaaggagcttcatag 124
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 937 ggtaaatctcttatttacctagtctattgatgctaatctaattcaaaaagagcttcatag 878
Query: 125 acacagaaataatgtttcactagctttttggacatctcttgaccaatcaaattagcatat 184
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 877 acacagaaataatgtttcactagctttttggtcatctcttgaccaatcaaattagcatat 818
Query: 185 gtaattaactatcacccatgcataccttaatttcttctgcttctagacatgtttttaaag 244
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 ataattaactatcatccatgcataccttaatttcttctgcttctagacatgtttttaaag 758
Query: 245 gctatagcacttgacaggagggccatatttagtacaaggttttagtttcaggaatgataa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gctatagcacttgacaggagggccatatttagtacaaggttttagtttcaggaatgataa 698
Query: 305 gtctaccatagcttattcacacccaatttgccataatagatctataaagtatcaactata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 gtctaccatagcttattcacacccaatttgccataatagatctataaagtatcaactata 638
Query: 365 ggagataagaatataagaagttcataatctaggattgagcatagacaacaactccagtaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ggagataagaatataagaagttcataatctaggattgagcatagacaacaactccagtaa 578
Query: 425 gactatttttgaaaaaaagatcatttctgagaaagttcatttgtaagtggattatgtgag 484
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gactatttttgaacaaaagatcatttctgagaaagttcatttgtaagtggattatgtgag 518
Query: 485 aggcagtcagtgtcatttattgctacggacattctctttctcacgatctaacttttctct 544
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 517 aggcagtcagtgtcatttattgctacggacattctctttctcatgatctaacttttctct 458
Query: 545 tgtaggtgtctgtgctcctccattctggatgaacctgagcatttgatcttacagcatc 602
|||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 457 tgtaggagtctgtgcccctccattctggatgaacctgagcatttgagcttacagcatc 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_p24.g1 MSMg01no523_p24.g1 CHROMAT_FILE:
MSMg01no523_p24.g1 PHD_FILE: MSMg01no523_p24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:07 2005
(614 letters)
>mm_chr18_88556812_88557825
Length = 1014
Score = 1174 bits (607), Expect = 0.0
Identities = 613/615 (99%), Gaps = 1/615 (0%)
Strand = Plus / Plus
Query: 1 agaaatgcacagagaaatggctttaaggtgaatgcagaaagtttataaagattataaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 agaaatgcacagagaaatggctttaaggtgaatgcagaaagtttataaagattataaata 259
Query: 61 tgtaaacatagtttagaaaacacaagtttattccctgtcaccataaaggcactaaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgtaaacatagtttagaaaacacaagtttattccctgtcaccataaaggcactaaaagaa 319
Query: 121 taacagacacaataccaaacaggacagctggctaatgtatcagattattttagatattaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 taacagacacaataccaaacaggacagctggctaatgtatcagattattttagatattaa 379
Query: 181 ttatgggtgggtaagtgaaaagtctctctgtactgcagtctcaattcttctataaatcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttatgggtgggtaagtgaaaagtctctctgtactgcagtctcaattcttctataaatcca 439
Query: 241 aaacttgccaaaaa-tatagtacaataaataaataaatatgaacgaattaataaatagac 299
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 440 aaacttgccaaaaaatatagtacaataaataaataaatatgaacgaatgaataaatagac 499
Query: 300 aagctagatcagtggtcaagtagcaaaacagactgtaagggtagcaattaccctctggtg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aagctagatcagtggtcaagtagcaaaacagactgtaagggtagcaattaccctctggtg 559
Query: 360 gtgcctttctttcctttggagcttgatactgacagaggacagtttagcatctcagtaggt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtgcctttctttcctttggagcttgatactgacagaggacagtttagcatctcagtaggt 619
Query: 420 gccatattggttgccagtggtgttggaccatgggcacagctggctcaggaatttaattaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gccatattggttgccagtggtgttggaccatgggcacagctggctcaggaatttaattaa 679
Query: 480 taggtgttgctctggagttccagcttttggctggggtgtaaaatgattcattcccaagta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 taggtgttgctctggagttccagcttttggctggggtgtaaaatgattcattcccaagta 739
Query: 540 gaaactagacattttcatatctgaacttataaggatgaactgacacttttatttcaacag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gaaactagacattttcatatctgaacttataaggatgaactgacacttttatttcaacag 799
Query: 600 accattgcgccattc 614
|||||||||||||||
Sbjct: 800 accattgcgccattc 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
