XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAGTA
TCTAAGGGAGAGGCTGAGGACCTCCAAGAGCTCCTAGAGTAGCCTTATAG
GAAACCTGCTTTGAAGTGGGGTAGGATGTGGGCACAAGGGGAAACAGCAA
CCATTGGAACCTCACTGTAAAACTTAACTATGCAAATATTTCTGGTTCTG
GTTGTATTAGAAAAGAATCTAGAGCATCACATGAGCTAGCTGAGTGCCCA
CTGACTGAACCACTCCTGACAGGTGTGCAAACCTCTCTTGAACTTACACT
ACACCTGAGCAAGTCTTAAACCTATAATTTTCCTGCCTCATCCTCCCCAG
TAGTTGGGATTACAGGACTGCCACCATGCCCAGCAGACAAAATAATTGCA
AATTCTTTCATTTATGAAAAATTAAGGTGTTAGGTATAAGAATACAGGTA
CTAACATGTATTTAAAGAAATAAGTCTTTACTTAATATTGGTGTCAACAA
GAATCATCTCTATACTTGAATCAGTCATACAGTTGATTTGTTTTCTCATT
TGTAGGTATGTCTATTCCTAAAAGTTCACTATGAACTTTCAAAAGAAGAT
CATGATGACAGGTATAATTTTAACTTCATTTACTATATCATACAGTTATA
TATCCAAATGAATCAAATTCAGCATAAGTAAGCACAACATGTTCTCTGGT
ATAGTGTTTACAGTAGCCAAGTTATAGGGTCATCAAGTATGTATACCAGC
AGAAGACTANGTA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXCTTCTTTATGTCCTCTACCATCATCATGAGATATGCTT
TTAAATCCAGGTCTACCTTTTCAGGTGTGTTAGGGTGTCCTGGATTGGGC
GAAGTGGGCGTTCTGGGTTCTGATGATGGTGAGTGGTCCTGGCTTCTGTT
AGTAGGATTCTTACGTTTACCTTTCGCCATCTGGCAATCTCTGGAGTTAG
TTGTTATAGTTGTCTTTGTTAAAAGATTGTTCCTCTGTTGATTTTGTTAC
CCTCTATCAGCAGGCGTGGGAGACAAGCTCTCTTCTCTGAGTTTCAGTGG
TCAGAGCAGTCTCTGTAGGCAAGCTCTCCTCTCTCAGGGAAGGTGTACAG
TTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGGTGAAGGCCCAAAAAAG
GGTCTTTCCCAGAAGCTGTGTTGCTTTGGCCAGGAAGGTGGCCAGTTGTC
TGGAGTCGAAGATGTCGCAGCCTCAGAAGCTCTGTGGCTCTTGCCGGGAA
GGTGGCTGGTTGTCTGGAGCTGAGGATGGTGCCGCCCCAGAATCTCTGCG
ACTCTCTCGCCCGTCCCAGAAACGGCTGGCACTCTGTATTCCACATGGTC
ACCCGTGCAGCCTGCCCTCCGCGGAGTCCCGGAGCCAAGAAGGCTCCCGC
CGGCGCCTGTGCCACAAACCTCTCAAGCCAGGCAGACCCCCGTGCTCTCA
CCAAGAAAGTGGCCGGCTGTCTG

Query= MSMg01no524_n06.b1 MSMg01no524_n06.b1 CHROMAT_FILE:
MSMg01no524_n06.b1 PHD_FILE: MSMg01no524_n06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:13 2005
         (662 letters)



>mm_chr18_8569039_8570100
          Length = 1062

 Score = 1212 bits (627), Expect = 0.0
 Identities = 651/659 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattccagtatctaagggagaggctgaggacctccaagagctcctagagtagccttat 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagtatctaagggagaggctgaggacctccaagagctcctagagtagccttat 263

                                                                       
Query: 64  aggaaacctgctttgaagtggggtaggatgtgggcacaaggggaaacagcaaccattgga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aggaaacctgctttgaagtggggtaggatgtgggcacaaggggaaacagcaaccattgga 323

                                                                       
Query: 124 acctcactgtaaaacttaactatgcaaatatttctggttctggttgtattagaaaagaat 183
           |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 324 acctcactgtaaaacttaacaaagcaaatatttctggttctggttgtattagaaaagaat 383

                                                                       
Query: 184 ctagagcatcacatgagctagctgagtgcccactgactgaaccactcctgacaggtgtgc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctagagcatcacatgagctagctgagtgcccactgactgaaccactcctgacaggtgtgc 443

                                                                       
Query: 244 aaacctctcttgaacttacactacacctgagcaagtcttaaacctataattttcctgcct 303
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaatctctcttgaacttacactacacctgagcaagtcttaaacctataattttcctgcct 503

                                                                       
Query: 304 catcctccccagtagttgggattacaggactgccaccatgcccagcagacaaaataattg 363
           |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 504 catcgtccccagtagttgggatcacaggactgccaccatgcccagcagacaaaataattg 563

                                                                       
Query: 364 caaattctttcatttatgaaaaattaaggtgttaggtataagaatacaggtactaacatg 423
           ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 564 caaattctttcatttatgaaaaattaaggtaataggtataagaatacaggtactaacatg 623

                                                                       
Query: 424 tatttaaagaaataagtctttacttaatattggtgtcaacaagaatcatctctatacttg 483
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 624 tatttaaagaaataagtctttacttaatattggtgtcaacaagaatcacctctatacttg 683

                                                                       
Query: 484 aatcagtcatacagttgatttgttttctcatttgtaggtatgtctattcctaaaagttca 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aatcagtcatacagttgatttgttttctcatttgtaggtatgtctattcctaaaagttca 743

                                                                       
Query: 544 ctatgaactttcaaaagaagatcatgatgacaggtataattttaacttcatttactatat 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctatgaactttcaaaagaagatcatgatgacaggtataattttaacttcatttactatat 803

                                                                      
Query: 604 catacagttatatatccaaatgaatcaaattcagcataagtaagcacaacatgttctct 662
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 catacagttatatatccaaatgaatcaaattcagcataagtaagcacaacatgttctct 862


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space:   685904
Effective search space used:   685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)