XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATCCTTG
ATCACTAATTTGTTCTAAGCCTATTTTTTTTCTAGCACAATTTACAAGTT
TGTGGTGCATGAAAGTTCACTGTATGCCTTTGCATACAGTCTTTACTATT
CTATGAAGGGGGAGGCACCTTCTATCATTGATTCTAACTTTATTGTATCT
TTCTGGTAAAACAACTAAAACCATTTCTTCAACTTTCTATTAATTTGGAC
AAACAGAAATTCTCTAAAACCATTAATGCCTCTAACCAGCTTTAATTCAT
GAATGTTCATCTTCCCTGCTGATCTGCAGGATATTTGCCCAATAGGGCGG
GCTGATACCAAGGAAACTATTGGCAATGACCATTTTTCCAGACAGTGACA
GATAAATGAGAACTGTGATATGGAAAGGTATATCAGCAGGCAAGAAGCTA
TCCTGGGATGAAGTCTCTGGGTTCCTTGTGTCTTCAAAGCATAACCATAG
TAGCTGTACAAAACAGTGGGCTATCTCCTGAAAACTCACTTGCCTGGCAC
AGCCTTCCCTGAATGGCTCTTGAAATATTTGGACAAGATTTTGCGTTAAT
TAGCATTGTCTTCTGTCACACCTTTGTACAAAAATTATTGACTTTTCTTA
GCCAACTCTCAGAGCTTCTCATTGCAACTCTCTAAGGAATTCGGGCTATT
TTGTTTCAGCCAGCACTGAAATTTCTGTTTCTAGGCACATGTTTAGAAAA
CTACTGATGCTTTAG

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXTGACCCTGGCTTCACCTACTGCTTTCAGCACAGT
CTTGGTTTTGTGATTCGTAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAA
AAAACAAAAAAAAAACAAGACAGTGAATTTGCATGAAAAGCATTTTATTG
TAATTGGTGTCTTTGGGTTATAGTTTAATTAAGTATTACAAACAGCTTCT
GGTACATTTTATTAATTTAGGAGAAAGCCTAATTATTTATTGTTTTGAAA
GTTAAAATGTCTTTCCAACTGGCATATTAGTTACACAGATGATTCAATAA
ATATTTCAAGTAGTCTTTGAAGGAATTTGTTTCACATTAATTTTAATTAT
TGAGAAACTTTTTAATTATTCAAACATTTGCATTGGCCTTCTTAAAGTTC
TTGTTATTCCCATTCCTAGGCATAAATAAAATGACAATTATTAATAGTAA
ACTACAATATATTCTCTAGGCACCCCACAAAGAGTTTCAAAAAAATTTTA
TGTGATTAAGTCACATTTCACATTCATCACAAAATCTGTGGCTTATATCC
GGAGAAACACACCTATAAAATAAATTATTAAAATTTATGTGCTTTGAATA
ATTTCCTAAATAATACCGAAAGAGATTTAGAATAAACGTAAGGGACATTT
CTTGAAATGTGGGCTATGTTCAGCAATTCAAAAAACATCCTGTGATGAGC
ACTGAAAAGTTCCAGGCTGAAGTCAAAG

Query= MSMg01no525_f16.g1 MSMg01no525_f16.g1 CHROMAT_FILE:
MSMg01no525_f16.g1 PHD_FILE: MSMg01no525_f16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:56 2005
         (489 letters)



>mm_chr18_52092981_52093869
          Length = 889

 Score =  799 bits (413), Expect = 0.0
 Identities = 458/489 (93%), Gaps = 25/489 (5%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgaccctggcttcacctactgctttcagcacagtcttggttttgtgattcgtaaaaaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 tgaccctggcttcacctactgctttcagcacagtcttggttttgtgattcgtaaaaaaaa 705

                                                                       
Query: 61  aaaaaaaaaaaaaaaaaaaacaaaaaaacaaaaaaaaaacaagacagtgaatttgcatga 120
           |||||||||||||||                         ||||||||||||||||||||
Sbjct: 704 aaaaaaaaaaaaaaa-------------------------aagacagtgaatttgcatga 670

                                                                       
Query: 121 aaagcattttattgtaattggtgtctttgggttatagtttaattaagtattacaaacagc 180
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gaagcattttattgtaattggtgtctttgggttatagtttaattaagtattacaaacagc 610

                                                                       
Query: 181 ttctggtacattttattaatttaggagaaagcctaattatttattgttttgaaagttaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ttctggtacattttattaatttaggagaaagcctaattatttattgttttgaaagttaaa 550

                                                                       
Query: 241 atgtctttccaactggcatattagttacacagatgattcaataaatatttcaagtagtct 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 atgtcttttcaactggcatattagttacacagatgattcaataaatatttcaagtagtct 490

                                                                       
Query: 301 ttgaaggaatttgtttcacattaattttaattattgagaaactttttaattattcaaaca 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 489 ttgaaggaatttgtttcacattaattttaattattgagaaactttttaattattcagaca 430

                                                                       
Query: 361 tttgcattggccttcttaaagttcttgttattcccattcctaggcataaataaaatgaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tttgcattggccttcttaaagttcttgttattcccattcctaggcataaataaaatgaca 370

                                                                       
Query: 421 attattaatagtaaactacaatatattctctaggcaccccacaaagagtttcaaaaaaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||
Sbjct: 369 attattaatagtaaactacaatatattctctaggcaccccacaaagagtttcagagtaat 310

                    
Query: 481 tttatgtga 489
           |||||||||
Sbjct: 309 tttatgtga 301


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 889
Length adjustment: 10
Effective length of query: 479
Effective length of database: 879
Effective search space:   421041
Effective search space used:   421041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)