Query= MSMg01no526_a02.b1 MSMg01no526_a02.b1 CHROMAT_FILE:
MSMg01no526_a02.b1 PHD_FILE: MSMg01no526_a02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:48 2005
(560 letters)
>mm_chr18_13852578_13853537
Length = 960
Score = 1067 bits (552), Expect = 0.0
Identities = 555/556 (99%)
Strand = Plus / Plus
Query: 5 gaattctatatcactgtccacctttaagcacccctgctttttcattatttatttatttat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatatcactgtccacctttaagcacccctgctttttcattatttatttatttat 264
Query: 65 tttaaaacaaaagcaattggtttccaacaggcaggataataagtctttttgacctgcctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttaaaacaaaagcaattggtttccaacaggcaggataataagtctttttgacctgcctt 324
Query: 125 cttctttgacccagaaggtcacgcctgtgctcgggcacagagctggcttaagaaatacct 184
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttctttgacccagaaggtcacccctgtgctcgggcacagagctggcttaagaaatacct 384
Query: 185 ccaagtcatacatttcatctcctgcccactcaaaatagagcttcctttaaatgtgtctgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaagtcatacatttcatctcctgcccactcaaaatagagcttcctttaaatgtgtctgt 444
Query: 245 acagggtccccgaaggccagagagccttccctgcagtgggcaatggagggacagaagcct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acagggtccccgaaggccagagagccttccctgcagtgggcaatggagggacagaagcct 504
Query: 305 ctgcctttattaatgaatgcaggcctttatgagtctggctggctccttccctgttcccag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgcctttattaatgaatgcaggcctttatgagtctggctggctccttccctgttcccag 564
Query: 365 aagcatatactgtacgtgacttaaaatgctagcatattgacacaaagcgagctgggcacc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagcatatactgtacgtgacttaaaatgctagcatattgacacaaagcgagctgggcacc 624
Query: 425 tctaaggaaaattactccttggatataatgtaggctcgtaacagctattagagtacagaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctaaggaaaattactccttggatataatgtaggctcgtaacagctattagagtacagaa 684
Query: 485 taaaaccccgtgggatcaggctgacatataccgcattctacctagtcctcaaacattaga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taaaaccccgtgggatcaggctgacatataccgcattctacctagtcctcaaacattaga 744
Query: 545 agaatttctttctgaa 560
||||||||||||||||
Sbjct: 745 agaatttctttctgaa 760
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space: 522500
Effective search space used: 522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_a02.g1 MSMg01no526_a02.g1 CHROMAT_FILE:
MSMg01no526_a02.g1 PHD_FILE: MSMg01no526_a02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:48 2005
(657 letters)
>mm_chr18_14021341_14022398
Length = 1058
Score = 1218 bits (630), Expect = 0.0
Identities = 642/646 (99%), Gaps = 1/646 (0%)
Strand = Plus / Minus
Query: 13 gaaaagaaaagaaaagagagggagggaggcagagagaaacaaagaaagatagacttacat 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 gaaaagaaaagaaaagagagggagggaggcagagagaaacaaagaaagatagacttacat 816
Query: 73 ctgtcttatttctggaacttaacaccagatcctagactgacagagaatgactctgagctc 132
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 815 ctgtcttatttctggaacttaacatcagatcctagactgacagagaatgactctgagctc 756
Query: 133 tgaatttcacctttgaacaagaatgatccctgtcagttgttgtctctagaagagagaaga 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 tgaatttcacctttgaacaagaatgatccctgtcagttgttgtctctagaagagagaaga 696
Query: 193 gggaggctccttaagtgccagggtttgtaaagaccttttcttgtgttgtctcccttttcc 252
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gggaggctccttaagtgtcagggtttgtaaagaccttttcttgtgttgtctcccttttcc 636
Query: 253 tttcagag-aaaaaaaatgtagttagttccctctagatagcaatctgggctctgtttgct 311
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tttcagagaaaaaaaaatgtagttagttccctctagatagcaatctgggctctgtttgct 576
Query: 312 aaggccaagtgtgatgtagaccacagggcatattgtgggatggaaactggcagtagggat 371
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 575 aaggccaagtgtgatgtagaccgcagggcatattgtgggatggaaactggcagtagggat 516
Query: 372 tggtaagttttccgcagtgccatcatacttaaataaataatcaaatcaattccttgtcct 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 tggtaagttttccgcagtgccatcatacttaaataaataatcaaatcaattccttgtcct 456
Query: 432 ttttgaagtagtgcatgtcatcaaggctgctgtgctgtatctgaagctgagggctattgt 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ttttgaagtagtgcatgtcatcaaggctgctgtgctgtatctgaagctgagggctattgt 396
Query: 492 tctatgttcttgtctccatcttccctgttgcaggttcctctccatgcacagtgcttagat 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tctatgttcttgtctccatcttccctgttgcaggttcctctccatgcacagtgcttagat 336
Query: 552 gcccttacattggttctttcagctggtgtttgccagcattcttccattcagacaggtcat 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gcccttacattggttctttcagctggtgtttgccagcattcttccattcagacaggtcat 276
Query: 612 ttgtagacacagtgtagattaaagatgaacactagatactgtaagg 657
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ttgtagacacagtgtagattaaagatgaacactagatactgtaagg 230
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1058
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1048
Effective search space: 678056
Effective search space used: 678056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
