Query= MSMg01no526_i01.b1 MSMg01no526_i01.b1 CHROMAT_FILE:
MSMg01no526_i01.b1 PHD_FILE: MSMg01no526_i01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:27 2005
(534 letters)
>mm_chr18_28186397_28187330
Length = 934
Score = 996 bits (515), Expect = 0.0
Identities = 524/527 (99%)
Strand = Plus / Plus
Query: 8 gaattccacatcattatgcaagctctccatcgatcgcacacaagctggcagctgtaacca 67
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattccacatcattaagaaagctctccatcgatcgcacacaagctggcagctgtaacca 267
Query: 68 gcaaggtgcagaatcaagtctcctttactactgaatatgtatcatcatggctcctgtgca 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gcaaggtgcagaatcaagtctcctttactactgaatatgtatcatcatggctcctgtgca 327
Query: 128 tcccaaccctacatatgaggtctgccagactcacagcagcttgaagagcagaacagggct 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tcccaaccctacatatgaggtctgccagactcacagcagcttgaagagcagaacagggct 387
Query: 188 ttgcaataaggctgttcaacttacttattatatagtccaggatcttgcattttaaacacc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttgcaataaggctgttcaacttacttattatatagtccaggatcttgcattttaaacacc 447
Query: 248 acagacaaagaacttggcactcctcagcactgctggtactcttggctcacacaaagcata 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 acagacaaagaacttggcactcctcagcactgctggtactcttggctcacacaaagcata 507
Query: 308 agaagaagcgagttactcctgcaaacacccacaccaagcccctggctgtaatctggtgag 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 agaagaagcgagttactcctgcaaacacccacaccaagcccctggctgtaatctggtgag 567
Query: 368 gcatttgaacctgcacattttagtctcttctaatgaaggtaggaaattatagaattctca 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gcatttgaacctgcacattttagtctcttctaatgaaggtaggaaattatagaattctca 627
Query: 428 ctagcagacacattgaatcagatagagagtgagatgagtaggttcagctatatgtgctct 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ctagcagacacattgaatcagatagagagtgagatgagtaggttcagctatatgtgctct 687
Query: 488 ctaatgattaaaatatccttgaagtacctacaattatctttggatat 534
|||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ctaatgtttaaaatatccttgaagtacctacaattatctttggatat 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 934
Length adjustment: 10
Effective length of query: 524
Effective length of database: 924
Effective search space: 484176
Effective search space used: 484176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_i01.g1 MSMg01no526_i01.g1 CHROMAT_FILE:
MSMg01no526_i01.g1 PHD_FILE: MSMg01no526_i01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:01:27 2005
(675 letters)
>mm_chr18_28305862_28306937
Length = 1076
Score = 1278 bits (661), Expect = 0.0
Identities = 672/676 (99%), Gaps = 1/676 (0%)
Strand = Plus / Minus
Query: 1 gggatttacctaagaatttcatgctgggagacagaaaacaatgatgcctgccaccagag- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 gggatttacctaagaatttcatgctgggagacagaaaacaatgatgcctgccaccagaga 817
Query: 60 aaaaaaacttgtctcccaggtgtgggacaaattgacagagttctgacaaatcctatgctg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 aaaaaaacttgtctcccaggtgtgggacaaattgacagagttctgacaaatcctatgctg 757
Query: 120 gtaggagagactgaagagacatttatgaggtagataagtgtggggccacattttagccat 179
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 756 gtaggagagactgaagagacatttatgaggtagataagtgtgggaccacattttagccat 697
Query: 180 gaatgctgaggcatgtgtacctcttgcccagttttaacttaaccctggagacagatttga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gaatgctgaggcatgtgtacctcttgcccagttttaacttaaccctggagacagatttga 637
Query: 240 gaaattttgcttcttagtttgctcctctccccaatgtggccatggcataactggcatttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gaaattttgcttcttagtttgctcctctccccaatgtggccatggcataactggcatttt 577
Query: 300 gaagatgagcatctgagcctagtttgttgggactaataggaccaaagtttggatcataaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gaagatgagcatctgagcctagtttgttgggactaataggaccaaagtttggatcataaa 517
Query: 360 gatgtcgaaattatgaaccctagatgaacatgtgtgacaaaggatggatgaacaaatcct 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gatgtcgaaattatgaaccctagatgaacatgtgtgacaaaggatggatgaacaaatcct 457
Query: 420 agtgattaatataatttctagtcacttcaacagaaccctcatccttactcatcatcctga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 agtgattaatataatttctagtcacttcaacagaaccctcatccttactcatcatcctga 397
Query: 480 acgccataaagcaaaacatctagaaggcatctactgtgcatccctaagcaccaagggaga 539
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 396 acgccataaagcaaaacatctagaagacatctactgtgcatccctaagcaccaagggaga 337
Query: 540 tcacagcatgtcttaccctttaaagataaattaaagacatgcaaaaatcatgagaatcca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tcacagcatgtcttaccctttaaagataaattaaagacatgcaaaaatcatgagaatcca 277
Query: 600 attaatcaataaaactaccagaattaacagaatgagaaagaaataagatgctgtnaatga 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 276 attaatcaataaaactaccagaattaacagaatgagaaagaaataagatgctgtaaatga 217
Query: 660 actgcactgtggatgt 675
||||||||||||||||
Sbjct: 216 actgcactgtggatgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1076
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1066
Effective search space: 708890
Effective search space used: 708890
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
