XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGTG
TAGCAGAAAAAGTACTAAAACATATTTCCACCTTTTTCCTTCTAGGCTTC
ATGGGAGATTAGGAAAAGCAGGTTTCACAATCTTCCTAAGCGGCATAAGA
GGAGCAAAGGAACTTAAAATTACTGTGTAGGAAGCCTGGCACACACTCAG
AGGAAAATGTTAAATGAAGAATAAGTGTCCAAACTTACGGCATCTTGTTG
AGGAATAAAATAGTCTTGGGGGATAGATTGCTGCTATAAATCTTGAGGAA
GAAGCAAGAGAAGGCCCTGCAGTCAACATGACCCAAGGACTCAGAAAAAA
AAGCAGCTTTCCGTAACTGCCTGCAGGCATATGTATTCGTAGACAATTAA
AGTGAGTCCTACTTGAGCCTGGTCACCATCCTATAGGTATATCGTAGGGA
TAGTGTGCTGCAGGGAATGAGCCGTGCTGTGGGGTGGACCCTGTGAGGAA
GAGAAGACCACTCTTCTCCAGAAGGCTGGCCCCACAGGAGAGAGTGACTC
AGGACACAGAGTCTAATTCTCAGGTGTCAAACACTTGGCTCATCACGGTT
CTTCGCTTTGCCTCCAGAAGTGTAAAGTATTTGCATAATTGATGCAGTTT
CTAAAACTGGACTATGCTTTGGATGTTATTTTTGACTTACATAATTTCCT
ATATATAAGAGCAGATAGCTGAAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCCTTATACTGGGGCATAGAACCTTCACAGGACCTA
AGGCCTCTCCTCACATTGATGACCTACTAAGCCACCCTCTACATATGCAG
CTAGATATGTAGGGAGACTTAATGACTGCTTCTATTTAGGGGTTATAAGA
CTATTTAAATTGTTTACCTGATCTTGATTTAACTTTGGTAAGTGGTATCT
ATCAAGAAAATCATCAACTTTGTTTATGTTCTCCAATTGTGTGGAGTATA
GGCTCTTGAAATTAGACCTGATGATTTTTTTTTTAAATTTTCTCAGTGTC
TGTTGTTATGTCATCCTATTCATTTCTAATTTTGTTAATTTGGATACTGT
CTCTGGACCCTCTAGTTAGTTTGGCTAAGGGTTTATCTTCTTGATTTTCT
CAAAGAAATAGCTCCTAGTTCTGTTGATTCTTTCTATAGTTCTCTCGGTT
TCTACTTGGTTGATTTCAGCCCTGAGTTTAATTATTTCCTGCCATCTACT
TCTCCTGGGTGGATTTGCTTCTTCTTGTTTTAGAGCTTTCAGATGTGCTG
TTAAGTTGCTAGTGTATAATCTCTCCAGTTTCTTTATGAAGGCACTCAGA
GCTATGAGTTTTTGTTTTAGTAACTCTTTGTGTCCCAAAAGTTTTGGGTA
TGTTGTGCCCTTATTTTCATTGAATTCTAAAAAGTTTN

Query= MSMg01no526_p07.b1 MSMg01no526_p07.b1 CHROMAT_FILE:
MSMg01no526_p07.b1 PHD_FILE: MSMg01no526_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:02 2005
         (637 letters)



>mm_chr18_6997399_6998432
          Length = 1034

 Score =  839 bits (434), Expect = 0.0
 Identities = 610/764 (79%), Gaps = 148/764 (19%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctgtgtagcagaaaaagtactaaaacatatttccacctttttccttctaggctt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  ggaattctgtgtagcagaaaaagtactaaaacatatttccacctttttccttctaggctt 148

                                                                       
Query: 64  catgggagattaggaaaagcaggtttcacaatcttcctaagcggcataagaggagcaaag 123
           |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 149 catgggagattaggaaaagcaggtttcacaatcttcctcagcagcataagaggagcaaag 208

                                                                       
Query: 124 gaacttaaaattactgtgtaggaagcctggcacacactcagaggaaaatgttaaatgaag 183
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 209 gaacttaaaattactgtgtaggaagcctggcacacacacagaggaaaatgttaaatgaag 268

                                                                       
Query: 184 aataagtgtccaaacttacggcatcttgttgaggaataaaatagtcttgggggatagatt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aataagtgtccaaacttacggcatcttgttgaggaataaaatagtcttgggggatagatt 328

                                                                       
Query: 244 gctgctataaatcttgaggaagaagcaagagaaggccctgcagtcaacatgacccaagga 303
           |||||||||||||||||||||||||||               |||||||||| |||||||
Sbjct: 329 gctgctataaatcttgaggaagaagca---------------gtcaacatgatccaagga 373

                                                                       
Query: 304 ctcagaaaaaaaagcagctttccgtaactgcctgcaggcatatgtattcgtagacaatta 363
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctcaggaaaaaaagcagctttccgtaactgcctgcaggcatatgtattcgtagacaatta 433

                                                                       
Query: 364 aagtgagtcctacttgagcctggtcaccatcctatagg------ta-------------- 403
           ||||||||||||||||||||||||||||||||||||||      ||              
Sbjct: 434 aagtgagtcctacttgagcctggtcaccatcctataggaaaagctaagaagctgccctgt 493

                                                                       
Query: 403 ------------------------------------------------------------ 403
                                                                       
Sbjct: 494 gcatgtttcctgccggattctaaccagccagagctcaaggcttctgacaatgaccagaga 553

                                                                       
Query: 404 -------------tat-------------------------------------cgtaggg 413
                        |||                                     |||||||
Sbjct: 554 cgttctggaaagctatgcatgactttaatgtcatttcccagaagaaagctattcgtaggg 613

                                                                       
Query: 414 atagtgtgctgcagggaatgagccgtgctgtggggtggaccctgtgaggaagagaagacc 473
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||
Sbjct: 614 atagtgtgctgcagggaatgagccgtgctgtggggtggaccctgtgaggaagaga---cc 670

                                                                       
Query: 474 actcttctccagaaggctggccccacaggagagagtgactcaggacacagagtctaattc 533
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 actcttctccagacggctggccccacaggagagagtgactcaggacacagagtctaattc 730

                                                                       
Query: 534 tcaggtgtcaaacacttggctcatcacggttcttcgctttgcctccagaagtgtaaagta 593
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tcaggtgtcaaacacttggctcatcacggttcttcgctttgcctccagaagtgtaaagta 790

                                                       
Query: 594 tttgcataattgatgcagtttctaaaactggactatgctttgga 637
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tttgcataattgatgcagtttctaaaactggactatgctttgga 834


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1034
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1024
Effective search space:   642048
Effective search space used:   642048
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)