Query= MSMg01no526_p13.b1 MSMg01no526_p13.b1 CHROMAT_FILE:
MSMg01no526_p13.b1 PHD_FILE: MSMg01no526_p13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:03 2005
(633 letters)
>mm_chr18_6050662_6051694
Length = 1033
Score = 1187 bits (614), Expect = 0.0
Identities = 625/629 (99%), Gaps = 1/629 (0%)
Strand = Plus / Plus
Query: 5 gaatt-aatacctgtcaatgagatctactcttccatttatttcctatagtttatgcacaa 63
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 204 gaattcaatacctgtcaatgagatctactcttccatttatttcctgtagtttatgcacaa 263
Query: 64 ctgttttgcctgtttgtttattgtgcccaatgaggtataatttagtctaggtcttacgtg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctgttttgcctgtttgtttattgtgcccaatgaggtataatttagtctaggtcttacgtg 323
Query: 124 ttctagggctgagcttcaatgtgtagtcaaaaatgaccttgaacttctttctgatcctat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttctagggctgagcttcaatgtgtagtcaaaaatgaccttgaacttctttctgatcctat 383
Query: 184 gcctacctgcagtgctggggattacacccagagctttgtgtatgtaaataagcactgtag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcctacctgcagtgctggggattacacccagagctttgtgtatgtaaataagcactgtag 443
Query: 244 caaatgagctactgctttagcccatcaatgattattatgaatcattagtgcttccccatg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caaatgagctactgctttagcccatcaatgattattatgaatcattagtgcttccccatg 503
Query: 304 acagattcacaatactattattttatgcatctatatacacatgtgtatatgttagagtat 363
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 504 acagattcacaatactattattttatgcatctatatacagatgtgtatatgttagagtat 563
Query: 364 agcatgtgtttgcatgtgagtctatgcaaacacatgcatgggatagaagaggacatgaag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agcatgtgtttgcatgtgagtctatgcaaacacatgcatgggatagaagaggacatgaag 623
Query: 424 tgttcttccctatcactctccacattttcctttagggcaaggtctttgcctaaatctaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgttcttccctatcactctccacattttcctttagggcaaggtctttgcctaaatctaaa 683
Query: 484 attcttgcttggggctaggctggcagccagcaaatcctagtgtttctcttgtctctgccc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 attcttgcttggggctaggctggcagccagcaaatcctagtgtttctcttgtctctgccc 743
Query: 544 ctactgcactgtagttctaagcaggtggggagaccgtgcatagcttgttacaggagtgtt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctactgcactgtagttctaagcaggtggggagaccgtgcatagcttgttacaggagtgtt 803
Query: 604 gggatcaaaactcangtcctgatgactgt 632
|||||||||||||| ||||||||||||||
Sbjct: 804 gggatcaaaactcaggtcctgatgactgt 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no526_p13.g1 MSMg01no526_p13.g1 CHROMAT_FILE:
MSMg01no526_p13.g1 PHD_FILE: MSMg01no526_p13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:04 2005
(662 letters)
>mm_chr18_6203027_6204088
Length = 1062
Score = 1251 bits (647), Expect = 0.0
Identities = 658/662 (99%)
Strand = Plus / Minus
Query: 1 ctcttctgtactccatgggcaccaggcaatcatgtggtatgatgtcataccacatgtggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 ctcttctgtactccatgggcaccaggcaatcatgtggtatgatgtcataccacatgtggt 803
Query: 61 atgatgaacataaaatctaattaaaacattttttaaagaaattaaatcattcctatcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 atgatgaacataaaatctaattaaaacattttttaaagaaattaaatcattcctatcttg 743
Query: 121 ttctttatttcaaacatgagttttataagaactaaaattttctctgcttttttcctattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ttctttatttcaaacatgagttttataagaactaaaattttctctgcttttttcctattt 683
Query: 181 caggtgttgaaaagtaattgaagtttgaagaggacataaaatcagtctttcactaactaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 caggtgttgaaaagtaattgaagtttgaagaggacataaaatcagtctttcactaactaa 623
Query: 241 cctctattccttgggattgtagaaatttaattttttaatgtgtaaattactcctagcctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 622 cctctattccttgggattgtagaaatttaattttttaatgtgtaaattactcctaccctg 563
Query: 301 tacagctgtttcctacccactcttgtaaactctgctgcttcccaacactagagtgcaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tacagctgtttcctacccactcttgtaaactctgctgcttcccaacactagagtgcaatg 503
Query: 361 ttgatgtcctagaagggaaacgacagtttacaactgcggccctgtttgttacacggtgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttgatgtcctagaagggaaacgacagtttacaactgcggccctgtttgttacacggtgtg 443
Query: 421 tccttcgtgtcttcactgtgctgagtaactatgttgagggactctgctccttgatttgcc 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 442 tccttcgtgtcttcactgtgctgagtaactgtgttgagggactctgctccttgatttgcc 383
Query: 481 tttctgtgagtgtgtaatcttggtttacattacctagctgctattgcttttcattttccc 540
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 382 tttctgtgagtgtgtaatcttggtttacattacatagctgctattgcttttcattttccc 323
Query: 541 ttttctactaaaatgtcttttttttttaaaggaaatatggaacatttagattaaatgtct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttttctactaaaatgtcttttttttttaaaggaaatatggaacatttagattaaatgtct 263
Query: 601 tanattttactacttataacactacttgccacaaaatatatcaggtcagtcagtactgta 660
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 taaattttactacttataacactacttgccacaaaatatatcaggtcagtcagtactgta 203
Query: 661 tt 662
||
Sbjct: 202 tt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
