Query= MSMg01no528_a23.b1 MSMg01no528_a23.b1 CHROMAT_FILE:
MSMg01no528_a23.b1 PHD_FILE: MSMg01no528_a23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:33 2005
(624 letters)
>mm_chr18_42933459_42934482
Length = 1024
Score = 1035 bits (535), Expect = 0.0
Identities = 591/613 (96%), Gaps = 12/613 (1%)
Strand = Plus / Plus
Query: 19 taaagtcaacagaggaaatggccagtcttaaaggaagagcccttgacaattgaaggaagg 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 taaagtcaacagaggaaatggccagtcttaaaggaagagcccttgacaattgaaggaagg 278
Query: 79 aattccagggaggaagacatcatctcttggttataaagccctt-agggttggagagatgg 137
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 279 aattccagggaggaagacatcatctcttggttataaagcc-ttgagggttggagagatgg 337
Query: 138 ctcagtgggggaaatgcttggtgtgtgaggatgcaggacccagtgaaatcacaagtaccc 197
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 338 ctcagtgggtgaaatgcttggtgtgtgaggatgcaggactcagtgaaatcacaagtaccc 397
Query: 198 ttgtaaaagtcaaacacatggtatgtagctgcgaatctagcactaaagagacagggacag 257
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 398 ttgtaaaagtcaaacacatggtatgtagctgtgaatctagcactaaagagacaggggcag 457
Query: 258 gagaatccacaggatactggccaggccaactagtgcagcttaagcaacagtctccacaaa 317
|||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||
Sbjct: 458 gagaatccacaggatactggccaggccaactagttcggctgaagcaacagtctccacaaa 517
Query: 318 caaggtggagagtgctaagaaagcacccaatgtctgctccaggatttacatgtgtattct 377
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 caaggtggagagtgctaagtaagcacccaatgtctgctccaggatttacatgtgtattct 577
Query: 378 gaggcaaatcca-cgcccccc-ccccccagtggctatggaggtagctcagttgatattga 435
|||||||||||| | |||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 578 gaggcaaatccaac-cccccctcccccc---ggctatggaggtagctcagttgatattga 633
Query: 436 acttgaatagcacgcacaaagcacttgaatagcactgcataaattgagtatggtggtaca 495
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 acttgaatagcatgcacaaagcacttgaatagcactgcataaattgagtatggtggtaca 693
Query: 496 tacatgcaatctcagctcttggaaggtaaaggcaggaggatcaaaagttcaaggtcctcc 555
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 694 tacatgcaatctcagctcttggaaggtaaaggcaggaggatcaaaagttcaaggtcatcc 753
Query: 556 ttagctacatagtgagctcagtccag----acacacatgagacgctgtctaaagaaaaaa 611
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 754 ttagctacatagtgagctcagtccagcctgacacacatgagacgctgtctaaagaaaaaa 813
Query: 612 tatccttggtgtt 624
|||||||||||||
Sbjct: 814 tatccttggtgtt 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_a23.g1 MSMg01no528_a23.g1 CHROMAT_FILE:
MSMg01no528_a23.g1 PHD_FILE: MSMg01no528_a23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:33 2005
(160 letters)
>mm_chr18_43118559_43119117
Length = 559
Score = 302 bits (156), Expect = 8e-87
Identities = 159/160 (99%), Gaps = 1/160 (0%)
Strand = Plus / Minus
Query: 1 ctaggagaacattttagacattcataaattctaagttttaaagttatatattttatgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctaggagaacattttagacattcataaattctaagttttaaagttatatattttatgggt 300
Query: 61 atttctaatctataagaaaaacctagaatatttacatattattggtgagagtgaagttaa 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 atttctaatctataag-aaaacctagaatatttacatattattggtgagagtgaagttaa 241
Query: 121 tataccctttgtggaaaacaattttataaaatatgtaaaa 160
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tataccctttgtggaaaacaattttataaaatatgtaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 160
Length of database: 559
Length adjustment: 8
Effective length of query: 152
Effective length of database: 551
Effective search space: 83752
Effective search space used: 83752
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
