AAAACCGCGCAACGATGGAATCGGATATCTTGACTCTGCTGCCGCGCAGA
CCATTTTAANGGNCATTNACTTCTGGNCCANCTTCTGAACTTNNGAAATG
GAAATACCNNCANCAATTNGAACNNAAAACCTTTCCAACCGNGGGGCCTT
TTGCCATNAAGGGCCTTTCCCTACAAACCTTTCATTTAAAAGCCCCATGC
CATTCCCATTTAAACAAACCCTCAAAAAATTCCCCGGGCCTTATTCAAGG
ANCCCCAATTTCCCCAAAAAACACCCCCCCCCNTTTTTGGGGGCTCCCCC
CCCCCAAATTCCCCTTTAAAAAAAAAAAAAAAAAAAAAAAACCCCCCCTT
CTTTCAAAAAAAAAAAACCNCCGCCCCCCCCTGTAAAAAAAAAAAGCCTT
TTCTCCCCCCNNNNNNAACCCCCCCCCACAAAAAAAAAAAAAAAAAAAAN
GGGGGTAAAAAACCCTCCGGGNCCCCACCGGGGCCCCCCCNCTTCCTCTT
AAAACCCCCACCCCACANNNNNNNNCCCAACCCCCCCCCCCCCCNCCCCC
CNNNANNNNNCCCCCCCCCCCCCCCACCACCCCCTCTCAAAAAAAAAAAA
AACCCCCCACGGTTCTTCCCTCAAAAAAAAAACAAACCCCCCCCCCACAC
AAANAGAAAAAAACAATCAAACCANACCCACCCCCCCCAAAGAATCAAAT
ATTATAGAATTTATGTTATN

ACGCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTAAAAAAAAAAGATTTATAGTAAA
TAATAGGTAAAATAATTAAGGAATAACTGAGTTCTGAAAGCATGGTTATT
AAAGTTGAATCTGCAAATAAATTATGTCTATAAACAGAATTAAATAAACA
AAATAAACATGTGAAATTATATATTCAATATAATTTTTCATGTTTAATAA
ATTTTGTTATTTTAATTAAGACCTGCTTAATAAGTAGTACTTTATTGACA
TTCAACAAGTAAACCTGTATATGGGCCCAAATAAACAAATAAAATAGAAT
ATGTAAATTGAAACAATATGTGCTCACTATCATTAAACTATGTGTTTGTG
ATGTGATGTGATGTGTGTGTGTGTTTTGTATGTACATAAGTGTGTGCACA
CATACCTGTGTGTGCGCTTGTAGAGACTAAATCAGGATAGTCTTTTTCTA
TAACTTTGTAACTTATTACCTTAAGACAGGACCTCTTACTGTACCAGAAG
CTCACTGCCTGAACAAATTCTAAACAGAAGACCATCTTTCACATTAAGAG
AAAAAAGCAGACAGTTCAATGGCCATCTTAAATGAGCTTATAATTTCAGA
CCTTTAAGTGCCTAGAAAGGATAAACTTTCTTTTTTTTATATAGGGGTTA
TTTTTTTATTTTTAATTTTTTTACTTATTAGGGATTTTCTTCATTTACAT
T

Query= MSMg01no528_g11.g1 MSMg01no528_g11.g1 CHROMAT_FILE:
MSMg01no528_g11.g1 PHD_FILE: MSMg01no528_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:59 2005
         (583 letters)



>mm_chr18_52448620_52449602
          Length = 983

 Score = 1033 bits (534), Expect = 0.0
 Identities = 571/586 (97%), Gaps = 7/586 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   aaaaaaaagatttatagtaaataataggtaaaataattaaggaataactgagttctgaaa 63
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aaaaaaaa-atttatagtaaataataggtaaaataattaaggaataactgagttctgaaa 257

                                                                       
Query: 64  gcatggttattaaagttgaatctgcaaataaattatgtctataaacagaattaaataaac 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gcatggttattaaagttgaatctgcaaataaattatgtctataaacagaattaaataaac 317

                                                                       
Query: 124 aaaataaacatgtgaaattatatattcaatataatttttcatgtttaataaattttgtta 183
           |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 318 aaaataaacatgtgaaattatatattcaatgtaatttttcatgtttaatacattttgtta 377

                                                                       
Query: 184 ttttaattaagacctgcttaataagtagtactttattgacattcaacaagtaaacctgta 243
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 378 ttttaattaagacctgcttaataagtagtactttattgacattcaacaagtaaaactgta 437

                                                                       
Query: 244 tatgggcccaaataaacaaataaaatagaatatgtaaatt-gaaacaatatgtgctcact 302
           ||||||||||||||||||||||||||||||||| |||| | |||||||||| ||||||||
Sbjct: 438 tatgggcccaaataaacaaataaaatagaatatctaaaatagaaacaatatatgctcact 497

                                                                       
Query: 303 atcattaaactatgtgtttgtgatgtgatgt-----gatgtgtgtgtgtgttttgtatgt 357
           |||||||||||||||||||||||||||||||     ||||||||||||||||||||||||
Sbjct: 498 atcattaaactatgtgtttgtgatgtgatgtaatgtgatgtgtgtgtgtgttttgtatgt 557

                                                                       
Query: 358 acataagtgtgtgcacacatacctgtgtgtgcgcttgtagagactaaatcaggatagtct 417
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 558 acataagtgtgtgcacacatacctgtgtgtgcacttgtagagactaaatcaggatagtct 617

                                                                       
Query: 418 ttttctataactttgtaacttattaccttaagacaggacctcttactgtaccagaagctc 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttttctataactttgtaacttattaccttaagacaggacctcttactgtaccagaagctc 677

                                                                       
Query: 478 actgcctgaacaaattctaaacagaagaccatctttcacattaagagaaaaaagcagaca 537
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 678 actgcctgaacaaattctaaacagaagaccatctttcacagtaagagaaaaaagcagaca 737

                                                         
Query: 538 gttcaatggccatcttaaatgagcttataatttcagacctttaagt 583
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gttcaatggccatcttaaatgagcttataatttcagacctttaagt 783


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space:   557529
Effective search space used:   557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)