GAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGGATGCGC
GGAATTCTATCCTGTTTCTAACCCCAACATTTATTTTAATCTAAAAACAT
ATAGGTTCTTTTTAAAATTGTAAGATTATAAGTGTGGTAATTCTCACCTG
TAATCTGAGCACTCAGGAGGCTGAGGCAGGAGAATGGCCTCAAGTTTGAA
GCCAGCTGGACATTAGAGTTAGACCCTGTGAAAAATAATTAATGGACCAG
TGAGATGGCTCAATGGATAAGTGTGTCTGACACCAGGCCTGAACACCTGG
GTTTGATTCTGGGACCCACATGTTGACAGAGAGTGAATTTCTCCAAGTTG
TCCTCTGGCCTTCATATATGGTCTGTGGTGCACACACACACACACACACA
CACACACACACACATATATGGTCTGTGGTGCACACACACACACACACACA
CACACTGAAATCAATAAAATGTAAAACAGTTTAAAAAAAACTTTAAAAAT
GTATAATATATAACATGCTAATATGCATGGCTCGTGTTTTTGTTTATCAA
CTTGACACAAGCTGGAACATCTGGGAAAAGGGACTGAGAAAATGCCTCTA
TCAGATTGGCCGACAGACAAACTTATGGGGGGTTGTTGTTGTTATTGGTA
GTGGTGTGTGTGTGTGTGTCTTAAATGCCGCCTGGTTTATTTTTTCTACG
TTCAAACCTTTAAAATATTTTTGGGTCTTTGCCTACTCGTATTTCATATA
TCTTATTGAAT

NCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTGGAAAGTCACTGATGCCACATT
AAGGGTAGTGACGATCAAGATGAGCCTAGTATATCCGTGACTGGCACAGA
ATGTTCTGTATACTGCGATTTATTGCTAAATAAAACAAAGAGTTCGTTCT
AACCAAACTGTATACCAGAAAGGAATATGCCCATTTTAATACACTGGCAA
ACAAGTCCATAAGAAATTATGAACCCATACTTAATTCCAGATGGGAGTTA
ACAATTTTTACTAAACCGATATTAGCAATCTCCAAGTTATATAAACAACA
TAAAGAGAATTAGGGTAATCTTGAAATATTGTTAGTATTTGTGTCCTTGT
AAAATTTTAGGGAGAAACGTTGACACTGTGAGGACGAAGTGACCCCAATA
CTAAGGGAAAGGCACATGGACAAATGGTAATCAAGTGAAACTTGTATAAA
CAACTTTTAAGACGAAACTGCTCTTACCATATGACCCTGCATCTGCTTCT
CGGTTTTTACCCAAAGCATCCGAGGGCTTACAGTAGCTTTATTCGTAATT
GCAAAAATAAAAATAAAAAAATAAATAAAAATCCTGGAAGCGGCCAGGAT
TCATAGGTAAATGGGACCTAAACTATATTGCATAGGAAAACAGAATACAG
AGATGGAGAGAGAAACATCACTAAGTGAAAGGACAGAATCTAGCANGCTG
TGTCTGTGCAGCTCCAAGTGTGAC

Query= MSMg01no530_k13.g1 MSMg01no530_k13.g1 CHROMAT_FILE:
MSMg01no530_k13.g1 PHD_FILE: MSMg01no530_k13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:03 2005
         (657 letters)



>mm_chr18_68083755_68084811
          Length = 1057

 Score = 1077 bits (557), Expect = 0.0
 Identities = 607/627 (96%), Gaps = 7/627 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttggaaagtcactgatgccacattaagggtagtgacgatcaagatgagcctagtatatcc 60
           |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 627 ttggaaagtcactgatgctacattaagggtagtgaccatcaagatgagcctagtatatcc 568

                                                                       
Query: 61  gtgactggcacagaatgttctgtatactgcgatttattgctaaataaaacaaagagttcg 120
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gtgactggcagagaatgttctgtatactgcgatttattgctaaataaaacaaagagttcg 508

                                                                       
Query: 121 ttctaaccaaactgtataccagaaaggaatatgcccattttaatacactggcaaacaagt 180
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 507 ttctaaccaaactgtataccagaaaagaatatgcccattttaatacactggcaaacaagt 448

                                                                       
Query: 181 ccataagaaattatgaacccatacttaattccagatgggagttaacaatttttactaaac 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ccataaaaaattatgaacccatacttaattccagatgggagttaacaatttttactaaac 388

                                                                       
Query: 241 cgatattagcaatctccaagttatataaacaacataaagagaattagggtaatcttgaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cgatattagcaatctccaagttatataaacaacataaagagaattagggtaatcttgaaa 328

                                                                       
Query: 301 tattgttagtatttgtgtccttgtaaaattttagggagaaacgttgacactgtgaggacg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tattgttagtatttgtgtccttgtaaaattttagggagaaacgttgacactgtgaggacg 268

                                                                       
Query: 361 aagtgaccccaatactaagggaaaggcacatggacaaatggtaatcaagtgaaacttgta 420
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aagtgaccccactactaagggaaaggcacatggacaaatggtaatcaagtgaaacttgta 208

                                                                       
Query: 421 taaacaacttttaagacgaaactgctcttaccatatgaccctgcatctgcttctcggttt 480
           |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 207 taaacaacttttaaaacgaaactgctcttaccctatgaccctgcatctgcttctcgattt 148

                                                                       
Query: 481 ttacccaaagcatccgagggcttacagtagctttattcgtaattgc--aaaaataaaaat 538
           ||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||| 
Sbjct: 147 ttacccaaagcatccgagggcttacagtagctttattcgtaattgcccaaaaaaaaaaac 88

                                                                       
Query: 539 aaaaaaataaataa-----aaatcctggaagcggccaggattcataggtaaatgggacct 593
           ||||||| ||| ||     |||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  aaaaaaaaaaaaaacaaaaaaatcctggaagcggccaggattcataggtaaatgggacct 28

                                      
Query: 594 aaactatattgcataggaaaacagaat 620
           |||||||||||||||||||||||||||
Sbjct: 27  aaactatattgcataggaaaacagaat 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)