Query= MSMg01no531_i21.b1 MSMg01no531_i21.b1 CHROMAT_FILE:
MSMg01no531_i21.b1 PHD_FILE: MSMg01no531_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:13 2005
(673 letters)
>mm_chr18_89506560_89507633
Length = 1074
Score = 1002 bits (518), Expect = 0.0
Identities = 556/572 (97%), Gaps = 9/572 (1%)
Strand = Plus / Minus
Query: 7 gaattccatagcc---tttcccatctttgaaactatatcctatctaggccaccttcatta 63
||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 566 gaattccatagccaga--tcccatctttgaaactatatcctatctaaaccaccttcatta 509
Query: 64 atacagaagttaataaataagtttcaggtctgtctgtttctcactgtgaaccactaccat 123
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 508 atacagaagttaataaataagtttcaggtctgtctatttctcactgtgaaccactaccat 449
Query: 124 aatctgagcataccataggatctttcctgacacccacatctatcctttctctccatttta 183
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 agtctgagcataccataggatctttcctgacacccacatctatcctttctctccatttta 389
Query: 184 gagccacattatgcttaatatagacatatatctgcctatatacatctgcaagtatgccct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gagccacattatgcttaatatagacatatatctgcctatatacatctgcaagtatgccct 329
Query: 244 gccaacttctacactagactacaattctcagatgctagtaatcttgtcctttttttccct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gccaacttctacactagactacaattctcagatgctagtaatcttgtcctttttttccct 269
Query: 304 ttgtaaagctgacttctaacaaatacttgttatgatgggtacctagtgcctaatttctat 363
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 268 ttgtaaagctgacttctaacaaatatttgttatgatgggtacctagtgcctaatttctat 209
Query: 364 ggaaaattatctatttaaataaaattaaaatagaattacttcccacatacatttaaaata 423
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ggaaaa-tatctatttaaataaaattaaaatagaattacttcccacatacatttaaaata 150
Query: 424 atgaaagtagagacttcctcgagaaacttctttgctcttattattaagaacattttgtca 483
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 atgaaagtagagacttccttgagaaacttctttgctcttattattaagaacattttgtca 90
Query: 484 agagtatattattagtttctgtcaaaaatgcatcaaatataggttaaaattccatcagaa 543
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 agagtatatcattagtttctgtcaaaaatgcatcaaatataggttaaaattccatcag-- 32
Query: 544 aaaaaaaattaaaataaaggtccattagtaaa 575
|||||||||||||||||||||||||||||||
Sbjct: 31 -aaaaaaattaaaataaaggtccattagtaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1074
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1064
Effective search space: 705432
Effective search space used: 705432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_i21.g1 MSMg01no531_i21.g1 CHROMAT_FILE:
MSMg01no531_i21.g1 PHD_FILE: MSMg01no531_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:13 2005
(608 letters)
>mm_chr18_89364271_89365278
Length = 1008
Score = 1129 bits (584), Expect = 0.0
Identities = 602/608 (99%), Gaps = 1/608 (0%)
Strand = Plus / Plus
Query: 1 aagtaaaagggctttagagtgaagtttatttccccaggacagtgaggcatttaaagaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtaaaagggctttagagtgaagtttatttccccaggacagtgaggcatttaaagaact 260
Query: 61 gatgagattcaggtgggtgtattagaaaacttcctctgacacacaataatacatgtgtat 120
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 261 gatgagattcaggtgggtgtattagaaaacttcctctgacgcacaataatacatgtgtgt 320
Query: 121 agtggaggaccacactgctacttcatttccatgctttcagacatacagttagcatagcag 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatggaggaccacactgctacttcatttccatgctttcagacatacagttagcatagcag 380
Query: 181 ccaaggctagccttgtaccccaaattatgattaatgtataaggctgtttggtttataatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 ccaaggctagccttgtaccccaaattatgattaatgtataaggctgtttggcttataatg 440
Query: 241 atttcttctttgccaaatgtagtcctgctttcctagtatttccattatgacctcaggcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttcttctttgccaaatgtagtcctgctttcctagtatttccattatgacctcaggcat 500
Query: 301 cagccacatctttcaagttgacttgaccaagaaggggaatgtcataattttgttaatcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagccacatctttcaagttgacttgaccaagaaggggaatgtcataattttgttaatcaa 560
Query: 361 acaacagataaaattgttatcttttggtgttcccaagacttagaatatattcttcaagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaacagataaaattgttatcttttggtgttcccaagacttagaatatattcttcaagtt 620
Query: 421 ccaacagtggcactctaatcttaatgacatccaacagctgtctaagtagactacagaccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccaacagtggcactctaatcttaatgacatccaacagctgtctaagtagactacagaccc 680
Query: 481 actcaatatgaggaaaatgcctggttctagaaacttagataactgccaagggctagtgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 actcaatatgaggaaaatgcctggttctagaaacttagataactgccaagggctagtgat 740
Query: 541 ttttaaagaaagtcatcactttactagaccatcataattcttaactgcattctaaaaatt 600
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 741 ttttaaagagagtcatcactttactagaccatcataattcttaactgcattctaaaa-tt 799
Query: 601 tatcctta 608
||||||||
Sbjct: 800 tatcctta 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
