Query= MSMg01no532_a02.b1 MSMg01no532_a02.b1 CHROMAT_FILE:
MSMg01no532_a02.b1 PHD_FILE: MSMg01no532_a02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:49 2005
(700 letters)
>mm_chr18_54526378_54527477
Length = 1100
Score = 1324 bits (685), Expect = 0.0
Identities = 694/697 (99%)
Strand = Plus / Plus
Query: 4 ggaattctgccaaggttacggagactaaaatttatttaagctctaaatattttttcttca 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgccaaggttagggagactaaaatttatttaagctctaaatattttttcttca 263
Query: 64 caaagctctggttttccaccacatcagtgttttaatgattttgcttcctcttcttacagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 264 caaagctctggttttccaccacatcagtgttttaatgattttgcttcctcttcttactgg 323
Query: 124 tctagcagtccaggatccaggagttcttgattgtccaaccagactattgacactacacag 183
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctagcagtctaggatccaggagttcttgattgtccaaccagactattgacactacacag 383
Query: 184 tatacacaatacatctggggagacaaaacatcttcaactctaaaatatagaaaaaacaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatacacaatacatctggggagacaaaacatcttcaactctaaaatatagaaaaaacaac 443
Query: 244 atagcatggaatgatttgaaaaggttttcagaaatatttaaatgaagagtttataaggct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atagcatggaatgatttgaaaaggttttcagaaatatttaaatgaagagtttataaggct 503
Query: 304 gtcatataatctgttacaggcaataattcacttcctccagctcaatttctttcttctctc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtcatataatctgttacaggcaataattcacttcctccagctcaatttctttcttctctc 563
Query: 364 ccaatggcaactagatacagtgcaaaaactgagattctccattttttaattaattaatta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccaatggcaactagatacagtgcaaaaactgagattctccattttttaattaattaatta 623
Query: 424 attagttagttaattacttttttacactccatatattattccccccaccctccatccacc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 attagttagttaattacttttttacactccatatattattccccccaccctccatccacc 683
Query: 484 ctctgactgtttcacatccatcccatcctatacctcctctgtacctacttgtctccacat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctctgactgtttcacatccatcccatcctatacctcctctgtacctacttgtctccacat 743
Query: 544 ggatgtccccacccccaccccacctgacctccaaattccatggggccaccagtcttttga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ggatgtccccacccccaccccacctgacctccaaattccatggggccaccagtcttttga 803
Query: 604 gggttaggtgcatcatctctgaatgaacacagatccagaagtcctctattgtatgtgtgt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gggttaggtgcatcatctctgaatgaacacagatccagaagtcctctattgtatgtgtgt 863
Query: 664 tgggagcctcatattggctggtatatgttgcctcttt 700
|||||||||||||||||||||||||||||||||||||
Sbjct: 864 tgggagcctcatattggctggtatatgttgcctcttt 900
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 700
Length of database: 1100
Length adjustment: 10
Effective length of query: 690
Effective length of database: 1090
Effective search space: 752100
Effective search space used: 752100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no532_a02.g1 MSMg01no532_a02.g1 CHROMAT_FILE:
MSMg01no532_a02.g1 PHD_FILE: MSMg01no532_a02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:08:49 2005
(608 letters)
>mm_chr18_54666254_54667262
Length = 1009
Score = 1036 bits (536), Expect = 0.0
Identities = 548/552 (99%), Gaps = 1/552 (0%)
Strand = Plus / Minus
Query: 58 acacacacacacacagaggcacactcaccttaaccaagaaattattcaaattgatgcctc 117
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 832 acacacacacacacagaggtacgctcaccttaaccaagaaattattcaaattgatgcctc 773
Query: 118 tcaggaaaggagcgatataccaatggagagtcacataatatatcagcagcactcctggca 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 tcaggaaaggagcgatataccaatggagagtcacataatatatcagcagcactcctggca 713
Query: 178 gacatcatgctctggagtagatgaccagggcaaaatgaactcactcaagagtagttggcc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gacatcatgctctggagtagatgaccagggcaaaatgaactcactcaagagtagttggcc 653
Query: 238 agcacatggtt-gggggggggtgctctttcttttgtttgagtattgtttttgttttattg 296
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agcacatggttggggggggggtgctctttcttttgtttgagtattgtttttgttttattg 593
Query: 297 attttaaattttgttttgattttgattttctgtcactgtgttgttcatttgtgaaagaga 356
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 actttaaattttgttttgattttgattttctgtcactgtgttgttcatttgtgaaagaga 533
Query: 357 gagagagagtgccttaagttgagtaggtaggggagtgattattatctggaaggagaggaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 gagagagagtgccttaagttgagtaggtaggggagtgattattatctggaaggagaggaa 473
Query: 417 agaatatgatcaaaaaatgcattatacgaaaaacattttaataaaaataatcaaagggaa 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 agaatatgatcaaaaaatgcattatacgaaaaacattttaataaaaataatcaaagggaa 413
Query: 477 aatgatagttctaaggacctttgatattacctagaatgtaattctcagtctggggttgtc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aatgatagttctaaggacctttgatattacctagaatgtaattctcagtctggggttgtc 353
Query: 537 atagccatactccttagcagtctcttgcattcaaacatcaaaagaactttagtggtatta 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 atagccatactccttagcagtctcttgcattcaaacatcaaaagaactttagtggtatta 293
Query: 597 agcaatttaaac 608
||||||||||||
Sbjct: 292 agcaatttaaac 281
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1009
Length adjustment: 10
Effective length of query: 598
Effective length of database: 999
Effective search space: 597402
Effective search space used: 597402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
