NNGGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCAGAAGGTTCAGACTTTAGCACTATACAAGCCATCTCCAG
CACTGCATAAAGCAGATATGGTAATCCATGCCTATGAACCCAGAATGCAG
TAGAATTAGAAAGTCAAGGTCAGCCTTGGGTATGTGATGATTTGGTGGGT
TAAAGAAGACCCCGTCATAACAAACAAACAAACAAATGGAAGACTTCTAA
AGTTTATAATACCAATACTACATGTTGTCCAGCATTGTCCAATATATAGC
AGTATGACTGATGATTCCATTATGATAGGGCTGTAGCACTGTGTAGACTC
TATGAAAGGCATTAACATTTTGTAAACAATTATTCTTGTTTGTACTGTGT
GGTCTGGAACCTACTGTGCCTTTGTATTTATTTAAATGAGTTCAAAAGAA
AAGGACAGGCATATGTGAATATGAATATGTTCAGCAGCAACCAAGGAGTC
CTCTAGTAGGTTCAAAGTTCAAAGCTGTGCTTCTCAAATACTGAGAGAGA
CAGAGACATAGAGAGATAGAGAGACAGAGACAGCATGGACACACAGACAC
AAACACACACAAACAGAGACAGAGAGAGACAGAGACAGAGAGAGACACAG
AGAGAGAGAGAAAGAGAGAGAAATTTTCAAATGGAGTAAATTATACATTC
AAATTGGGAGCTTGAGGGTTGTGTGGGGCTCCCTTATAGCATGGTACATG
CCCAGN

NNCCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTATCA
TGAATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATG
ATCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGAT
GGATTTTCGTATATTAAACTATCCCTGCATCCCTGGAATAAAACCTACTT
GGTCAGGATGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGA
ATTTTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAA
GTTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATAG
TGGCTTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATTTTGTGA
AATAGTTTGTGAAGAATTGGAATTAGATCTTCTTTGAAGGTCTGATAGAA
CTCTGCACTAAACCCATCTGGTCCTGGGCTTTTTTTGGTTGGGAGACTAT
TAATAACTGCTTCTATTTCTTTAGGTGATATGGGACTGTTTAGATGGTCA
ACTTGATCTTGATTCAACTTTGGTACCTGGTAACTGTCCAGAAATTTGTC
CATTTCGTCCAGGTTTTCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGG
ATCTGATGGTGTTTTGGATTTCTTCAGGATCTGCTGTTATGTCTCCCTTT
T

Query= MSMg01no532_h06.b1 MSMg01no532_h06.b1 CHROMAT_FILE:
MSMg01no532_h06.b1 PHD_FILE: MSMg01no532_h06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:09:23 2005
         (702 letters)



>mm_chr18_48773468_48774569
          Length = 1102

 Score = 1336 bits (691), Expect = 0.0
 Identities = 697/699 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccagaaggttcagactttagcactatacaagccatctccagcactgcataaagc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 ggaattccagaaggttcagactttagcactatacaagccatctccagcactgcataaagc 811

                                                                       
Query: 64  agatatggtaatccatgcctatgaacccagaatgcagtagaattagaaagtcaaggtcag 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 agatatggtaatccatgcctatgaacccagaatgcagtagaattagaaagtcaaggtcag 751

                                                                       
Query: 124 ccttgggtatgtgatgatttggtgggttaaagaagaccccgtcataacaaacaaacaaac 183
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 750 ccttgggtatgtgatgatttggtgggttaaagaagactccgtcataacaaacaaacaaac 691

                                                                       
Query: 184 aaatggaagacttctaaagtttataataccaatactacatgttgtccagcattgtccaat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 aaatggaagacttctaaagtttataataccaatactacatgttgtccagcattgtccaat 631

                                                                       
Query: 244 atatagcagtatgactgatgattccattatgatagggctgtagcactgtgtagactctat 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 atatagcagtatgactgatgattccattatgatagggctgtagcactgtgtagactctat 571

                                                                       
Query: 304 gaaaggcattaacattttgtaaacaattattcttgtttgtactgtgtggtctggaaccta 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaaaggcattaacattttgtaaacaattattcttgtttgtactgtgtggtctggaaccta 511

                                                                       
Query: 364 ctgtgcctttgtatttatttaaatgagttcaaaagaaaaggacaggcatatgtgaatatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ctgtgcctttgtatttatttaaatgagttcaaaagaaaaggacaggcatatgtgaatatg 451

                                                                       
Query: 424 aatatgttcagcagcaaccaaggagtcctctagtaggttcaaagttcaaagctgtgcttc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aatatgttcagcagcaaccaaggagtcctctagtaggttcaaagttcaaagctgtgcttc 391

                                                                       
Query: 484 tcaaatactgagagagacagagacatagagagatagagagacagagacagcatggacaca 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tcaaatactgagagagacagagacatagagagatagagagacagagacagcatggacaca 331

                                                                       
Query: 544 cagacacaaacacacacaaacagagacagagagagacagagacagagagagacacagaga 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cagacacaaacacacacaaacagagacagagagagacagagacagagagagacacagaga 271

                                                                       
Query: 604 gagagagaaagagagagaaattttcaaatggagtaaattatacattcaaattgggagctt 663
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 270 gagagagaaagagagagaaattttcaaaaggagtaaattatacattcaaattgggagctt 211

                                                  
Query: 664 gagggttgtgtggggctcccttatagcatggtacatgcc 702
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gagggttgtgtggggctcccttatagcatggtacatgcc 172


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1102
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1092
Effective search space:   755664
Effective search space used:   755664
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)