GGGAAGAAGGTCTATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCAGTGACTCTATATGAAATCTTTGAACATTTGTAGA
AAAATAACCATGATGGTTGTTTTCTTTTAGGGTCTTTGAACAAACTCTCA
AGGAAAGAAATGAGCAGAGTAATAAAGTTGACTGGCTCCAGATGCACAGA
AACAGTTAAAGGTTTCTGAGTGTGCACGGGAAGAGAATCTTCTCTCCTGC
AGCCGTGCAGTTGAAGTTGTAGAAAATCAAGCCCAAGCTCTGGTGTGCTT
AACTGAATTACAACACAAATTTGATTCCCAGCCTTATAGAATGTCAATTA
CTGAGCACTGTAAAGTATAGACACAGATGCACAGGAGAAACCCATGAAAT
TAACGTGCATCTTCACAGGCATACAGCTTCTGAGCACTGTCATGTATAGG
TGTGTACACATTTGTTCACATCCATGTCCTTTCCACCAATGACAGTTGTG
TGACATGTTCAGGGACATGTTCACACATGCAATTTCCAAATGCTCTCACC
TCAGTGTTCTTGGACAAGCTTGTATGCATGCAATTTCCAGATACTCTCAT
ATGTAGGCATGCATACACATGTTCACACATACACACAGTTTTTGAGCACT
GCCATATATAGGTGCATCTGCATATGGTCACATGCATGCAAATTTTTAGC
ACTCTCATATGTCATTGTGTATGCAAATCGGG

CCTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGG
CAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG
CAAATCAAAACAACACTGAGATTCCACTTCACTCCAGTCAGAATGGCTAA
GATCAAAAACTCAGATGACAGCAGATGCTGGCGAGGATGTGGAGAAAGGG
GAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGG
AAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGA
TCCCGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTA
AGAAGGACACATGCTCCACTATATTCATAGCAGCCTTATTTATAATAGCC
AGAAGCTGGAAAGAACCCAGATGCTCCTCAACAGAGGAATGGATACAGAA
AATGTGGTACATTTACACAACGGAATACTACTCAGCTATTAAAAAAATGA
ATTTATGAAATTCCTAGTCAAATGGATGGACCTGGAGGGCATCATCCTGA
GTGAGGTAACCCAATCACAAAGGAACTCACACTATATGTACTCACTGATA
AGTGGATATTATCCCATAAATTTAGGATATCCTATATATAAGATACAACT
TGCTTAAACGCATGAAATTCAAGAAGAAGGAAGATCATAGTGTGTA

Query= MSMg01no533_a04.b1 MSMg01no533_a04.b1 CHROMAT_FILE:
MSMg01no533_a04.b1 PHD_FILE: MSMg01no533_a04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:06 2005
         (677 letters)



>mm_chr18_62860231_62861307
          Length = 1077

 Score = 1249 bits (646), Expect = 0.0
 Identities = 667/674 (98%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagtgactctatatgaaatctttgaacatttgtagaaaaataaccatgatggtt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagtgactctatatgaaatctttgaacatttgtagaaaaataaccatgatggtt 263

                                                                       
Query: 64  gttttcttttagggtctttgaacaaactctcaaggaaagaaatgagcagagtaataaagt 123
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 264 gttttcttttagggtctttgaacaaactctcaaggaaagaaatgagcagagtaataaaat 323

                                                                       
Query: 124 tgactggctccagatgcacagaaacagttaaaggtttctgagtgtgcacgggaagagaat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgactggctccagatgcacagaaacagttaaaggtttctgagtgtgcacgggaagagaat 383

                                                                       
Query: 184 cttctctcctgcagccgtgcagttgaagttgtagaaaatcaagcccaagctctggtgtgc 243
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| 
Sbjct: 384 cttctctcctgcagccgtacagttgaagttgtagaaaatcaagcccaagctctggtgtgg 443

                                                                       
Query: 244 ttaactgaattacaacacaaatttgattcccagccttatagaatgtcaattactgagcac 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttaactgaattacaacacaaatttgattcccagccttatagaatgtcaattactgagcac 503

                                                                       
Query: 304 tgtaaagtatagacacagatgcacaggagaaacccatgaaattaacgtgcatcttcacag 363
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 504 tgtaaagtatagacacagatgcacaggagaaacccatgaaattaacatgcatcttcatag 563

                                                                       
Query: 364 gcatacagcttctgagcactgtcatgtataggtgtgtacacatttgttcacatccatgtc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gcatacagcttctgagcactgtcatgtataggtgtgtacacatttgttcacatccatgtc 623

                                                                       
Query: 424 ctttccaccaatgacagttgtgtgacatgttcagggacatgttcacacatgcaatttcca 483
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttttccaccaatgacagttgtgtgacatgttcagggacatgttcacacatgcaatttcca 683

                                                                       
Query: 484 aatgctctcacctcagtgttcttggacaagcttgtatgcatgcaatttccagatactctc 543
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 684 aatgctctcacctcagtgttcttggacaagtttgtatgcatgcaatttccagatactctc 743

                                                                       
Query: 544 atatgtaggcatgcatacacatgttcacacatacacacagtttttgagcactgccatata 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atatgtaggcatgcatacacatgttcacacatacacacagtttttgagcactgccatata 803

                                                                       
Query: 604 taggtgcatctgcatatggtcacatgcatgcaaatttttagcactctcatatgtcattgt 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 taggtgcatctgcatatggtcacatgcatgcaaatttttagcactctcatatgtcattgt 863

                         
Query: 664 gtatgcaaatcggg 677
           ||||||||||||||
Sbjct: 864 gtatgcaaatcggg 877


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space:   711689
Effective search space used:   711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)