Query= MSMg01no533_b18.b1 MSMg01no533_b18.b1 CHROMAT_FILE:
MSMg01no533_b18.b1 PHD_FILE: MSMg01no533_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:14 2005
(475 letters)
>mm_chr18_81133034_81133908
Length = 875
Score = 833 bits (431), Expect = 0.0
Identities = 465/477 (97%), Gaps = 4/477 (0%)
Strand = Plus / Plus
Query: 1 caagttgtgttcgctggtttgtccattattgtttgc--tttctcaaattacgattttctt 58
||||||||||| |||||||||| ||||||||||| | ||||||||||||||||||||||
Sbjct: 201 caagttgtgtttgctggtttgttcattattgttt-ctttttctcaaattacgattttctt 259
Query: 59 tctgagcaagtatgtggtcatgtctcctagctctacatactaactgggtagactttatat 118
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 260 tctgagcaagtatgtggtcatgtctccaagctctacatactaactgggtagactttatat 319
Query: 119 ctagagataaagaatgtggagatagttttacatcagtaagtagtgtggtccagggagcac 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctagagataaagaatgtggagatagttttacatcagtaagtagtgtggtccagggagcac 379
Query: 179 tccagtgaaacctgagatgtgttctcagatactgactatagtcaccgacacttcttacaa 238
||||||| |||||||||||||||||||||||||| ||||| | || ||||||||||||||
Sbjct: 380 tccagtg-aacctgagatgtgttctcagatactgcctataatgactgacacttcttacaa 438
Query: 239 gacactgataggactctagtgtccagcttcttaaaactctgggccctgactctacctggc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gacactgataggactctagtgtccagcttcttaaaactctgggccctgactctacctggc 498
Query: 299 ttcacataatgtaaaagtcatggaatctttgagaccagtaatagctttctgactgtttga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttcacataatgtaaaagtcatggaatctttgagaccagtaatagctttctgactgtttga 558
Query: 359 caaccaaaaaccaattcaaaatcagtgaatctgataagttttgggcagtcctcgactgtg 418
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 559 caaccaaaaaccaattcaaaatcagtgaatctgagaagttttgggcagtcctcgactgtg 618
Query: 419 ctgtatcatgtgacttcactgcagccttatgtctgaacatgcaccatgtgacctttg 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctgtatcatgtgacttcactgcagccttatgtctgaacatgcaccatgtgacctttg 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_b18.g1 MSMg01no533_b18.g1 CHROMAT_FILE:
MSMg01no533_b18.g1 PHD_FILE: MSMg01no533_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:14 2005
(466 letters)
>mm_chr18_81314171_81315036
Length = 866
Score = 824 bits (426), Expect = 0.0
Identities = 453/462 (98%)
Strand = Plus / Minus
Query: 5 agagcactcgggacttattcctgtgttgttctttcctcctggtgagatgaacaaacatct 64
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 agagcacgcgggacttattcctgtgttgttctttcctcctggtgagatgaacaaacatct 607
Query: 65 ccggctcatcaagaaccaggagaggagcccaggggcagcgccgaggcctgatctgcactc 124
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 606 ccggctcatcaagaaccaggagaggagcccaggggcagcgcggaggcctgatctgcactt 547
Query: 125 acctggcccctcttcaggattctttccaaagttctttcctcagatgggcagagactcact 184
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 546 acctggtccctcttcaggattctttccaaagttctttcctcagatgggcagagactcatt 487
Query: 185 cacccagggcctcctccgggtggatgataggtgtcggaaaatgactgcacttcccaagcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 cacccagggcctcctccgggtggatgataggtgtcggaaaatgactgcacttcccaagcc 427
Query: 245 ctctcgtgtgtcctcctcctcctcctccagttcagaagatggggcactggtccagctcag 304
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 426 ctctcgtgtgtcctcctcctcctcctccagttcagaagatgaggcactggtccagctcag 367
Query: 305 caggtttgcaggctgcacaattgctctgagtgctcacgaggctgtgagccaggctgtgag 364
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 366 caggtttgcaggctgcacaattgctctgagtgctcatgaggctgtgagccaggctgtgag 307
Query: 365 ctcccaggagatcagatggactgaccgagctgctatgcatcgtgcagccaaggccagcca 424
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 306 ctcccaggagatcagatggactgaccgagctgctatgcagcgtgcagccaaggccagcca 247
Query: 425 gtttcaggttgccttggccagggtgcatcttcctaaatgaca 466
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 246 gtttcaggttgccttggccaggatgcatcttcctaaatgaca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
