CCCTTCACTCTTTTTTTTTTGTCGGGGACAATAAGAATACTATATTCATA
GGATCCGCGGAATTCTGTTCTTTTCCGTACCCCCCTTTTAACTGGGTTAT
TACTTTTTGGGAGCCTAACTTCTTGACTTCTTTATGTATTTTGGATATTA
GCCATATATTGGAAGTGGGTTAGTTAAAATCTTTGACCCAATCTGTAGGC
TGCCGTTTTGTTCTATTGACGGTATCATTTGTTTTACCGAAGCTTTTCAG
TTTTAAGAAGTCCAATTTGTCAATTGTTGATCTTAGAGCCTGATCCATTG
GTGTTCTGTTTAGGAAAAAAAAATCAGAACTATGTGTTCAAGCCTATTTC
CCACTTTTATTTCTATTAGATTCAGTGTATATGGTTTGACAGTGAAGTCT
TTGATCCACTTGGACTTGAGCTTTGTGTATGCTGGTAGATAAGGATCAAA
TTGCATTTTCCTACATGCATACTGCCAGTTAGAGCAGAACCATTTGCTGA
AGATGCTTTCTTTTTTTCACTTTAAGGTTTTGGCTTCCTTTGTCCAAATC
AAGAGTCCCATTGTATTCTGTATCTTAGATTCTATTTCATTGATCAAACT
GTCTGCGTCTGTATGAATACCATGTGGGTGGGTTTTTTTTTAAAATCACC
ATTTGTCCCGTAGTATAACTTGAGGTCAAGGATGGGGAAATCTTTTAAAA
AGTCTTTTAATGGTCCAGAACTG

NTTTCCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATGAAGCTTTTCCTAAAT
TCTCCCCATAGAAGAGGTTTGAGCATTTGGATGTCTCCATTCAAATTGCT
GATTAGGAACAGTAGTTATAGTAATATTCAATTGAGCTTAACAAAGAGTT
GGCTCATTGCTTTGTAAAATCTTGAAGATTTATAGAAATTTCCTCAAGTG
AACCTTTAACTAGAATGGCCTCAATGAAAATTCACTTTCTCTTGCTGTTT
TTGTTTGTTTGTTTGTTTTGATTTTCTGTTTAAAATGTAATGAATATACA
CACTAAGTATTAAGTCATTAACATATTTTATCAATTAATCTATAATAATT
AATGTTCTTCTGTATTCCAGGTTTGTAAGGTATAAAGATATAGTGCTAAA
TTACATTATTTATATAGAGGTTAAGAAACCAGGAAAAACAGTTTTCAATT
ATTAATTGTTACACACTAACATTTATTGCATTATTCTTAAACATCTAATG
CCAATGATTATTCATGACTTCTCTGTTATATGCTCTACTCAATAACTTTC
CTATTGGCTTGGCATTCAGATAGAAAAGATGGTGTCTGCTTGTAAGGTAA
TGTTGATATAAAATGGCTCTATGTGCTAAATGAACTAAGAGTCTAGATTA
AAAAGCTGTGTTGTTCTAGAAACAAAGAAAGGTCTGAAGAGCTACCATGA
ATC

Query= MSMg01no533_p01.g1 MSMg01no533_p01.g1 CHROMAT_FILE:
MSMg01no533_p01.g1 PHD_FILE: MSMg01no533_p01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:16 2005
         (667 letters)



>mm_chr18_27052556_27053622
          Length = 1067

 Score = 1236 bits (639), Expect = 0.0
 Identities = 660/667 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   catgaagcttttcctaaattctccccatagaagaggtttgagcatttggatgtctccatt 60
           ||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||
Sbjct: 867 catgaagcttttcctaaattctccccatagaagaggtttgcccatttggatggctccatt 808

                                                                       
Query: 61  caaattgctgattaggaacagtagttatagtaatattcaattgagcttaacaaagagttg 120
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 807 caaattgctgattaggaacagtagttatagtaatattcaattaagcttaacaaagagttg 748

                                                                       
Query: 121 gctcattgctttgtaaaatcttgaagatttatagaaatttcctcaagtgaacctttaact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 gctcattgctttgtaaaatcttgaagatttatagaaatttcctcaagtgaacctttaact 688

                                                                       
Query: 181 agaatggcctcaatgaaaattcactttctcttgctgtttttgtttgtttgtttgttttga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 687 agaatggcctcaatgaaaattcactttctcttgctgtttttgtttgtttgtttgttttgg 628

                                                                       
Query: 241 ttttctgtttaaaatgtaatgaatatacacactaagtattaagtcattaacatattttat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ttttctgtttaaaatgtaatgaatatacacactaagtattaagtcattaacatattttat 568

                                                                       
Query: 301 caattaatctataataattaatgttcttctgtattccaggtttgtaaggtataaagatat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 caattaatctataataattaatgttcttctgtattccaggtttgtaaggtataaagatat 508

                                                                       
Query: 361 agtgctaaattacattatttatatagaggttaagaaaccaggaaaaacagttttcaatta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agtgctaaattacattatttatatagaggttaagaaaccaggaaaaacagttttcaatta 448

                                                                       
Query: 421 ttaattgttacacactaacatttattgcattattcttaaacatctaatgccaatgattat 480
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 447 ttaattgttacacactaacatttattgcattagtcttaaacatctaatgccaatgattat 388

                                                                       
Query: 481 tcatgacttctctgttatatgctctactcaataactttcctattggcttggcattcagat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tcatgacttctctgttatatgctctactcaataactttcctattggcttggcattcagat 328

                                                                       
Query: 541 agaaaagatggtgtctgcttgtaaggtaatgttgatataaaatggctctatgtgctaaat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agaaaagatggtgtctgcttgtaaggtaatgttgatataaaatggctctatgtgctaaat 268

                                                                       
Query: 601 gaactaagagtctagattaaaaagctgtgttgttctagaaacaaagaaaggtctgaagag 660
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gaactaagagtctagaataaaaagctgtgttgttctagaaacaaagaaaggtctgaagag 208

                  
Query: 661 ctaccat 667
           |||||||
Sbjct: 207 ctaccat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space:   694449
Effective search space used:   694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)