TAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTGATCTTTCCAGAACTTTTATCATGAATGGGTGTTGGATCTTGTCA
AATGCTTTTTCTGCATCCAACGAGATGATCATGTGGTTTTTGTCTTTGAG
TTTGTTTATATAGTGGATTACATTGATGGATTTTCGTATATTAAACCATC
CCTGCATTCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGCTTTA
ATGTGATCTTGGATTCGGTTAGCGAGAATTTTATTGAGGATTTTTGCATC
GATATTCATAAGAGAAATTGGTCTGAAGTTCTCTATCTTTGTTGGATCTT
TCTGTGGTTTAGGTATCAGAGTAATAGTGGCTTCATAAAATGAGTTGGGT
AGAGTACTTTCTACTTCTATCTTGTGAAAAAGTTTGTGCAGAACTGGAAT
TAGATCTTCTTTGAAGGTCTGATAGAACTCTGCACTAAACCCGTCTGGTC
CTGGGCTTTTTTTGGCTGGGAGACTATTTATAACTGCTTCTATTTCTTTA
GGGGATATGGGACTGTTTAGAAGGTCAACTTGATCCTGATTCAACTTTGG
TACCTGGTATCTGTCCAGAAATTTGTCCATTTCGTCCAGGTTTTCCAGTT
TTGTGAGTATAGCCTTTTGTAGAAGGATCTGATGGTGTTTTGGATTTCTT
CAGGATCTGTTGTTATGTCTCCCTTTTCA

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAAGACAGGAAATGGTTTCTTAGCTCTAAG
TGGTTCACTCTACTCCTCAAACATCAAATAAATGACATTCCCTAGGCATT
TTTGCCCCAATCTTCTTTACCTCTAGCTAAGGAATAATTCCAGTGACTAA
AGGAAATACATCTGGTGTCAAAAACAGAGGTTTCCTACGTGAGGTACAGG
ACCCAGTCAAGAGGAAGATGCTTTCCGTGTATCCTTGGAAACAACAATAG
TGAGAACATCTAAAATTTGTCAATGTGCATATTTGCAGGGTCCAGGCCAG
TTGCTAAAACTGGATCTCTCAAGATGAACCTCAATTCATTTCACATTACT
AGCTCCTTAGATGTGCTCTTCAGATAGCAGATGATTCAAAGGTTAGAGAA
TCTCTGTGTGGTATGGAAGGATATGGCTAAGTTGTGAGTTGAAGGCATAA
CTCCAGAAGACTAGAACACTACAAGTCACTGTTGTATATATTCATAACCT
GGATGGAGGAGTCATCTGTTACCCTACAAGTTGACCTTCACATGAGACTG
TTCTCCAGTGGACAGTAAGCTCTGTAAGAGCAGAACCCAAATTTTAATTC
TTCTTTGTTTCTCTGCTTTGCACAAAGAGGACTCCTAGCCATGCAAATGG
GTCAAAGAAAGGAAAAATGAGAAGAAAAATAG

Query= MSMg01no534_e05.g1 MSMg01no534_e05.g1 CHROMAT_FILE:
MSMg01no534_e05.g1 PHD_FILE: MSMg01no534_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:43 2005
         (661 letters)



>mm_chr18_27777385_27778445
          Length = 1061

 Score = 1224 bits (633), Expect = 0.0
 Identities = 654/661 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagacaggaaatggtttcttagctctaagtggttcactctactcctcaaacatcaaataa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 aagacaggaaatggtttcttagctctaagtggttcactctactcctcaaacatcaaataa 802

                                                                       
Query: 61  atgacattccctaggcatttttgccccaatcttctttacctctagctaaggaataattcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atgacattccctaggcatttttgccccaatcttctttacctctagctaaggaataattcc 742

                                                                       
Query: 121 agtgactaaaggaaatacatctggtgtcaaaaacagaggtttcctacgtgaggtacagga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtgactaaaggaaatacatctggtgtcaaaaacagaggtttcctacgtgaggtacagga 682

                                                                       
Query: 181 cccagtcaagaggaagatgctttccgtgtatccttggaaacaacaatagtgagaacatct 240
           |||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 681 cccagtcaagagaaagacgctttccgtgtatccctggaaacaacaatagtgagaacatct 622

                                                                       
Query: 241 aaaatttgtcaatgtgcatatttgcagggtccaggccagttgctaaaactggatctctca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaatttgtcaatgtgcatatttgcagggtccaggccagttgctaaaactggatctctca 562

                                                                       
Query: 301 agatgaacctcaattcatttcacattactagctccttagatgtgctcttcagatagcaga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agatgaacctcaattcatttcacattactagctccttagatgtgctcttcagatagcaga 502

                                                                       
Query: 361 tgattcaaaggttagagaatctctgtgtggtatggaaggatatggctaagttgtgagttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 501 tgattcaaaggttagagaatctctgtgtggtatggaaggatatggctaagttgtgagctg 442

                                                                       
Query: 421 aaggcataactccagaagactagaacactacaagtcactgttgtatatattcataacctg 480
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggcataactccagaagcctagaacactacaagtcactgttgtatatattcataacctg 382

                                                                       
Query: 481 gatggaggagtcatctgttaccctacaagttgaccttcacatgagactgttctccagtgg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatggaggagtcatctgttaccctacaagttgaccttcacatgagactgttctccagtgg 322

                                                                       
Query: 541 acagtaagctctgtaagagcagaacccaaattttaattcttctttgtttctctgctttgc 600
           || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actgtaaggtctgtaagagcagaacccaaattttaattcttctttgtttctctgctttgc 262

                                                                       
Query: 601 acaaagaggactcctagccatgcaaatgggtcaaagaaaggaaaaatgagaagaaaaata 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaagaggactcctagccatgcaaatgggtcaaagaaaggaaaaatgagaagaaaaata 202

            
Query: 661 g 661
           |
Sbjct: 201 g 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space:   684201
Effective search space used:   684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)