Query= MSMg01no535_o18.b1 MSMg01no535_o18.b1 CHROMAT_FILE:
MSMg01no535_o18.b1 PHD_FILE: MSMg01no535_o18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:52 2005
(350 letters)
>mm_chr18_24431582_24432331
Length = 750
Score = 611 bits (316), Expect = e-179
Identities = 325/328 (99%)
Strand = Plus / Plus
Query: 16 gaattctaagtttcactgttttaacatggaaattaggaaatacatgtttgtgtcttgtga 75
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattctaagtttcacagttttaacatggaaattaggaaatacatgtttgtgtcttgtga 275
Query: 76 tgctctatgttgcttctcttagaattcagcattatttttcttgaaataattggcttatta 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tgctctatgttgcttctcttagaattcagcattatttttcttgaaataattggcttatta 335
Query: 136 atgcttataaataagacaaatttgcagattagttgtactttttaatcccactacatgcct 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atgcttataaataagacaaatttgcagattagttgtactttttaatcccactacatgcct 395
Query: 196 atactaaaagatctagtatgaaaaaagatgttgctgtctgttatagtgaccttgacagta 255
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 396 atactaaaagatctagtatgaaaaaagatgttgctgtcagttatagtgaccttgacagta 455
Query: 256 aacagtttcttgtatcttgtttataatatgtcagttatgtatgtatgtatgtatgtatgt 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 aacagtttcttgtatcttgtttataatatgtcagttatgtatgtatgtatgtatgtatgt 515
Query: 316 atgtatgtatgtatgtatgtatgtatgt 343
|||||||||||||||| |||||||||||
Sbjct: 516 atgtatgtatgtatgtgtgtatgtatgt 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no535_o18.g1 MSMg01no535_o18.g1 CHROMAT_FILE:
MSMg01no535_o18.g1 PHD_FILE: MSMg01no535_o18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:53 2005
(642 letters)
>mm_chr18_24636336_24637376
Length = 1041
Score = 1203 bits (622), Expect = 0.0
Identities = 637/642 (99%), Gaps = 1/642 (0%)
Strand = Plus / Minus
Query: 1 tccatgtttgttttctgtcatttcaggaacttagtttcttataaagctgtaggcattgcc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 841 tccatgtttgttttctgtcatttcaggaacttagtttcttataaaactgtaggcattgcc 782
Query: 61 aaaaaccatcagtggtttaaaataccatttgattttcttgttttgatctttaccttaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aaaaaccatcagtggtttaaaataccatttgattttcttgttttgatctttaccttaatt 722
Query: 121 ctacaggtgcactatgtggacagagggtgagtatgacaacaaagcacactaggaatcttg 180
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 721 ctacaggtgcactgtgtggacagagggtgagtatgacaacaaagcacactagaaatcttg 662
Query: 181 ctttttaaaagtttggaaattattttaaatatgaccttttttttgtgtgtgttgccaatt 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 661 ctttttaaaagtttggaaattattttaaatatgacc-tttttttgtgtgtgttgccaatt 603
Query: 241 aaaattgtccttcattttttaatgaaccctaaaactgtacaagtgcactttgattagcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aaaattgtccttcattttttaatgaaccctaaaactgtacaagtgcactttgattagcaa 543
Query: 301 aaggagaaaaacatttcttcagtaactattttcagaagtgttaggattttttttacacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aaggagaaaaacatttcttcagtaactattttcagaagtgttaggattttttttacacct 483
Query: 361 tcctaaaaagaccaacaaaactaatgctcaaaatgttttcctgcagttctttaagactag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcctaaaaagaccaacaaaactaatgctcaaaatgttttcctgcagttctttaagactag 423
Query: 421 gaaacagtacactgaagaactccccagtgattcactttacctcaactcctaaaacacact 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gaaacagtgcactgaagaactccccagtgattcactttacctcaactcctaaaacacact 363
Query: 481 gcacaatcccttttttactcttcagaattcatgatctaaatcaggagaggctcagtagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcacaatcccttttttactcttcagaattcatgatctaaatcaggagaggctcagtagta 303
Query: 541 gtaacagggtggactttgtagacacataaggaatgactggcctggctcactgctgcagtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtaacagggtggactttgtagacacataaggaatgactggcctggctcactgctgcagtg 243
Query: 601 cttaacccttgttagcccaacccttggtacagtgcttgctca 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cttaacccttgttagcccaacccttggtacagtgcttgctca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1041
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1031
Effective search space: 651592
Effective search space used: 651592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
