Query= MSMg01no536_a10.b1 MSMg01no536_a10.b1 CHROMAT_FILE:
MSMg01no536_a10.b1 PHD_FILE: MSMg01no536_a10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:01 2005
(632 letters)
>mm_chr18_89295540_89296571
Length = 1032
Score = 1176 bits (608), Expect = 0.0
Identities = 623/628 (99%)
Strand = Plus / Plus
Query: 5 gaattcactcgatgttactttttctttccttttattggcaaaattccttccaatccaatc 64
|||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattcactcgatgggactttttctttccttttactggcaaaattccttccaatccaatc 264
Query: 65 acttaaattagttacttttctgttgctgtaatagaatatcctgacggaagccaagttaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acttaaattagttacttttctgttgctgtaatagaatatcctgacggaagccaagttaga 324
Query: 125 gaagaaagggcttcttttgacatacaatctcagggatagactctatcatgcttagagaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaagaaagggcttcttttgacatacaatctcagggatagactctatcatgcttagagaaa 384
Query: 185 gtatgacaacagaagtgtgaaactcacctgatagtcagaaaatatagtggtcatgttcta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtatgacaacagaagtgtgaaactcacctgatagtcagaaaatatagtggtcatgttcta 444
Query: 245 tccccacataggggaggcaggaagtagggctaggctataaaacctcaaagcttgctttcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tccccacataggggaggcaggaagtagggctaggctataaaacctcaaagcttgctttcc 504
Query: 305 ttagcatactttctctagaccgcaaggctctacctcttaaaggctccacaaccttctcta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttagcatactttctctagaccgcaaggctctacctcttaaaggctccacaaccttctcta 564
Query: 365 acagtactgccaactggggacaaagtgtgaaaatacttgagtctgtgggggacatttttt 424
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 actgtactgccaactggggacaaagtgtgaaaatacttgagtctgtgggggacatttttt 624
Query: 425 attcaaactaaaatatgatttatacaaaatgttaagttgttgaactttcatccaggtagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 attcaaactaaaatatgatttatacaaaatgttaagttgttgaactttcatccaggtagt 684
Query: 485 atttatcgagccccaataatgtactggcactttgatttgaatacataccattaatgagac 544
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atttatcgagtcccaataatgtactggcactttgatttgaatacataccattaatgagac 744
Query: 545 acataccccctttagcactttaagcgcaggcatttatttggggaaaaacgtgctgggcag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 acataccccctttagcactttaagcgcaggcatttatttggggaaaaacgtgctgggcag 804
Query: 605 tcacaagctgagggagttaaatgaagtc 632
||||||||||||||||||||||||||||
Sbjct: 805 tcacaagctgagggagttaaatgaagtc 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_a10.g1 MSMg01no536_a10.g1 CHROMAT_FILE:
MSMg01no536_a10.g1 PHD_FILE: MSMg01no536_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:14:01 2005
(563 letters)
>mm_chr18_89436947_89437909
Length = 963
Score = 673 bits (348), Expect = 0.0
Identities = 362/368 (98%), Gaps = 3/368 (0%)
Strand = Plus / Minus
Query: 1 tcacctgtctccgtctcttcctggaatacaaatttaggacagaatattaagactgtacac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tcacctgtctccgtctcttcctggaatacaaatttaggacagaatattaagactgtacag 306
Query: 61 gcaagcattggttatctgtactgtttcaattccttgctgtgaataagtagttatggctag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 305 gcaagcattggttatctgtactgtttcaattccttgctgtgaataagtagttgtggctag 246
Query: 121 atatagttgttttatgttttatgtgtacatcttccacagtgatgtttgactgccaacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 atatagttgttttatgttttatgtgtacatcttccacagtgatgtttgactgccaacttg 186
Query: 181 actagatttaaagtcatcatggaaacttatttctgggtgtgatttttgtttccagaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 actagatttaaagtcatcatggaaacttatttctgggtgtgatttttgtttccagaaatt 126
Query: 241 tttacctgaagaaagaagattcgtgctatatatgatggcatcaccatcctaagggccagg 300
||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 125 tttacctgaagaaagaagatttgtgctatatatg---gcatcaccatcctaagggccagg 69
Query: 301 gtcaaaggctcagtaacaagaagaaaatacaccaggaatcttttccctctggttcctgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 gtcaaaggctcagtaacaagaagaaaatacaccaggaatcttttccctctggttcctgac 9
Query: 361 tggataca 368
||||||||
Sbjct: 8 tggataca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
