Query= MSMg01no537_c12.b1 MSMg01no537_c12.b1 CHROMAT_FILE:
MSMg01no537_c12.b1 PHD_FILE: MSMg01no537_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:27 2005
(371 letters)
>mm_chr18_47481318_47482088
Length = 771
Score = 611 bits (316), Expect = e-179
Identities = 353/366 (96%), Gaps = 2/366 (0%)
Strand = Plus / Minus
Query: 5 gaattccaaggcaatgtctatgaagtgctcagggtccagttggtctcagagatgataaac 64
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 514 gaattccaaggcaatgtttatgaagtgctcagagtccagttggtctcagagatgataaac 455
Query: 65 ccttgtacctgctcccaggataaagaattttcaagataggcaaacaggcagacattcaag 124
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 454 ccttgtacctgctcccaggataaagaattgtcaagataggcaaacaggcagacattcaag 395
Query: 125 tggaataaataaccaagcacagcgaagaccaatggagataaggaagacgcaaggttggag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tggaataaataaccaagcacagcgaagaccaatggagataaggaagacgcaaggttggag 335
Query: 185 atagcgttgcctagatctttaccacaaatatttttcatgatagcagcagaaaaatgtttt 244
| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 334 acagcgttgcttagatctttaccgcaaatatttttcatgatagcagcagaaaaatgtttt 275
Query: 245 ccctgtcattaaaacaatggccaaggcagtgtgcagagtgtctggtttttgctgaagaac 304
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 274 ccctgtcattaaaacaatggccaaggcagcgtgcagagtgtctggtttttgctgaagaac 215
Query: 305 tcctaaaagttgtgtgtgtgtgtgtgtgtgt--gtgtatgtgtgtgtgtgtatgtgtgta 362
||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||
Sbjct: 214 tcctaaaagttgtgtgtgtgtgtgtgtttgtatgtgtatatgtgtgtgtatatgtgtgtg 155
Query: 363 tgtgtg 368
||||||
Sbjct: 154 tgtgtg 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_c12.g1 MSMg01no537_c12.g1 CHROMAT_FILE:
MSMg01no537_c12.g1 PHD_FILE: MSMg01no537_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:27 2005
(644 letters)
>mm_chr18_47385212_47386255
Length = 1044
Score = 1183 bits (612), Expect = 0.0
Identities = 636/644 (98%)
Strand = Plus / Plus
Query: 1 actcgcttgtaaatcactacagtttttagaagcacggtagtgacataaatgtacctattg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 actcgcttgtaaatcactacagtttttagaagcacggtattgacataaatgtacctattg 260
Query: 61 atcagtagatagaataagaaggaagaaaagtctaagaaagtcttcatggtataccagatg 120
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 261 atcagtagatagaataagaaggaagaaaggtctaagaaagtctttatggtataccagatg 320
Query: 121 atctcctttagggctcatgcgcaggagcaagatcattctcagtaagccggagtagtagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctcctttagggctcatgcgcaggagcaagatcattctcagtaagccggagtagtagtg 380
Query: 181 tccaaaagggatggttttatccccaggggtcatttggacgtgcgtcctggacagtgtttt 240
||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 381 tccaacagggatggttttatccccaggggtcatttggacgagcatcctggacagtgtttt 440
Query: 241 tgtagccacaacttggaagcaggtgctactgaacataatgaacagagatgacaggatgtt 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 tgtagccacaacttggaagcaggtgctactgaacataacgaacagagatgacaggatgtt 500
Query: 301 gctaacgttttgtgatgcacagggtggttggcacaacaaagagtcggccgtttccaacgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctaacgttttgtgatgcacagggtggttggcacaacaaagagtcggccgtttccaacgt 560
Query: 361 caataacaatgaggttgagaaaccatgacataaagggctgaatatgggatgtagaccttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caataacaatgaggttgagaaaccatgacataaagggctgaatatgggatgtagaccttg 620
Query: 421 ctcagcactgagagcttaaggaagtgaggttagggtctgagctggcagagatgagtctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctcagcactgagagcttaaggaagtgaggttagggtctgagctggcagagatgagtctgg 680
Query: 481 accacagtcagtaacctagacctggagctgagagaaaagaaacaattgggagaaacagag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 accacagtcagtaacctagacctggagctgagagaaaagaaacaattgggagaaacagag 740
Query: 541 agccgtgggaccaaatttgttctctcacgctccacccttgaggctgtgggggggctgttg 600
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 741 agccgtgggaccaaatttgttctctcacgctccacccttgaggctgtgggggagctgttg 800
Query: 601 gcaatgctgtgcgacacagatgccagtgtgcagcaggcttagtc 644
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcaatgctgtgcgacacagatgccagtgtgcagcaggcttagtc 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
