NGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCAGGTGCTTGCTGAGCAGTTTCTTGGCTGGAGAGATGAAGTT
GAGTTTATAATTTTGCAAAGGACTGTATTGTATTCCTCGGGTAGAAGACG
TGTTAGATAGGTTCCCCAAATCAGGCAGAGAAATAGAAGCCTTGCTAAGA
AAAGGGAGTCCTCCATTTTGCCTCAAGCTCAGGAAAGTGGTCCAGATGTG
ATAAAATACAATCTAAGTAGCAGAGTCCAACATCTTTGTGTAATTTCTAC
TACTTTAGATAATCCCTCACTCATATTCCTGAATGTAATGCCAATAAAAC
TCATTGGCTATTCAAGTTGTACATTGGTAGTGTCTATCCATTGGTCTATC
ATGAGCTCTCAATCTGGGAAAGGCCTGTCTCTCCTAAGTTATTAAACAGG
CCTTTGGCAATGCACTTGATTTTGTGGCCATAGTAGGCCATGTGATATTT
CCTCTTCAAACAAATGAGGTTTAACCAGGTACTCAGTTATCTTTTACTCC
ACAAATGTAGTCTTCTGAATTTTACCCCCTAAACCTGTCATCACAAGAGT
ATTTAACATGAGTGCAAATGTAAAATAAAAATATTAATTGTTGGTTGCAT
AGGTATTATAAACTAATGACATGATGGTAGCTAAAATCCAGAAGAAAACT
TAGCCTGAGTAATAAAATTTCTACTTCTTCTTCAAGTGCTGTTTN

NGGTACTATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAACAGATGAATCTTTAA
TGACAGAGAAGCACTTAAAGAAATATTCAAAGTTCTCAGTGATCAGGGAA
ATGCAAATCAAAATGACCCTGAGATTCCACCTTACAACAGTCAGAATGGC
TAAGATCAAAAGCTCAGGTGACAGCAGATGCTGGCAAGGATATGGAGAAA
GAGGAACACTCCTGGTGGGATTGCAAACTGGTAAAACCAATCTGGAAATC
AATCTGGAGGTTCCTCAGAAAATTGTAAAAAGATCTACCTGAAGATCCAG
AAATACCACTCTTGGGCATATACCTGAAAGTTGCCCCACCATGCCACAGG
GGCATGTGTTCCACTATGTTTATTGCAGTCTTTCTTTGTTCCAGTTTTCT
CTTGCTCTCTTCCTCCTCTACCTCCTCCTCTTTCTTCTTTTTCTTCTTTT
TTCATATTCCTCCTTTATTGAATGGGATTCATTCACTCTGTGCCATTTGA
GGTGGAGGTTTGTAAATTCATTCATTCTTTCTTTCTTTCTTTCTTTCTTT
CTTTCTTTCTTTCTTTCTTTCTTTCTCCCTTTCTTTCTTCTTTCTTCTTT
TTAAATTTTCTATAAAGGGCCCTATAGTGACAGTTTTCTCAACTATCAGG
AAAGACATTTGAATTTTAGTTGAAATTTTAGAGAGTATGGGCACC

Query= MSMg01no537_k02.b1 MSMg01no537_k02.b1 CHROMAT_FILE:
MSMg01no537_k02.b1 PHD_FILE: MSMg01no537_k02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:02 2005
         (627 letters)



>mm_chr18_17705935_17706961
          Length = 1027

 Score =  847 bits (438), Expect = 0.0
 Identities = 450/454 (99%)
 Strand = Plus / Minus

                                                                        
Query: 174  ctcaagctcaggaaagtggtccagatgtgataaaatacaatctaagtagcagagtccaac 233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1027 ctcaagctcaggaaagtggtccagatgtgataaaatacaatctaagtagcagagtccaac 968

                                                                        
Query: 234  atctttgtgtaatttctactactttagataatccctcactcatattcctgaatgtaatgc 293
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967  atctttgtgtaatttctactactttagataatccctcactcatattcctgaatgtaatgc 908

                                                                        
Query: 294  caataaaactcattggctattcaagttgtacattggtagtgtctatccattggtctatca 353
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907  caataaaactcattggctattcaagttgtacattggtagtgtctatccattggtctatca 848

                                                                        
Query: 354  tgagctctcaatctgggaaaggcctgtctctcctaagttattaaacaggcctttggcaat 413
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 847  tgagctctcaatctgggaacggcctgtctctcctaagttattaaacaggcctttggcaat 788

                                                                        
Query: 414  gcacttgattttgtggccatagtaggccatgtgatatttcctcttcaaacaaatgaggtt 473
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 787  gcacttgattttgtggccatggtaggccatgtgatatttcctcttcaaacaaatgaggtt 728

                                                                        
Query: 474  taaccaggtactcagttatcttttactccacaaatgtagtcttctgaattttacccccta 533
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 727  taaccaggtactcagttatcttttactacacaaatgtagtcttctgaattttacccccta 668

                                                                        
Query: 534  aacctgtcatcacaagagtatttaacatgagtgcaaatgtaaaataaaaatattaattgt 593
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 667  aacctgtcatcacaagagtatttaacatgagtgcgaatgtaaaataaaaatattaattgt 608

                                              
Query: 594  tggttgcataggtattataaactaatgacatgat 627
            ||||||||||||||||||||||||||||||||||
Sbjct: 607  tggttgcataggtattataaactaatgacatgat 574


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space:   627489
Effective search space used:   627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)