TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAAGTCAAGTCCCAGTGATCAAGAGCTCAGAGCTAATGATGTGAAGG
ATACTTATCCTCCAGGGTGATCATTTCTAGAGGGACTAGTGGGGAAAAGC
TCAAATGCTTCCCCTGACAAGCATTGTCAGAAAGGAAGAAAGCTCAGTTA
TGAGTTGAAAAAAGGGCTTCCTTTAAATCTGCCTTATGGCCACTTGGGAT
ATAACTCGGGTGCTCAAAAGCCAAGCAGATAGAAGCTTTAAGTGGTTCTA
GTATATATATTAAAAAAAATTAACCATGATACATATCACCTAGTATCATA
ACTGACTTCTAATATGTCCTTTGCCCACAAAAATAATGCATTAAATTATA
TAATATACATAAAGAGTTCAGAGCAGTGCCTTGGATGACTCCATGGATAT
TACTACATTCTGCAGAGTACATTTTGGTAAGTCCTCTTGAAACACTGCTC
AAACAAATTACTCTATCATTGTCTTTTAGAAAAGTCCCCAACTCCTTAGA
GTTGATACCACTGATGTCAACAAACACTGTGTGGAGTCTCTTTCTAAAAA
AGGAGGAGTTGAAAAAAAAAAAAAACACAAATGTCTCCAAGCTGCTCCAA
CCCAAATAGAGTTTCACAGGACAGAGATGTTCTTCATGCTTGAAGTGCAT
TAGCATCCTACACTCCATTCTTTGCCATGCTTTTCTACG

NNNCCATGCTGTGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAACAAAAACAGAAACAATAGGAAG
TCTACAAGGTCATGAAAACTGAACAGTTCACTACTCCATGACCACTGGAT
TGAGGAAGAAAGAAAGAAAGAAATTAAAGACATTTTAGAATTCTATGAAA
ATGAAGGTATAATATACCTAATTATATGGGATACAATGAAAACAGTGTTA
AGCGAAAAGTTCATAGCACTAAGTGCCTTTATAAAGAAACTGGAAAAGTC
TCATAGGATCAACTTAGATCTAGAACAAAAAGAAGCAAACACTCTTGAAG
AGGAGTAGACAGTAGGAAATTATCAAAACAAGTTCTTTGAGAAAATCAAA
ATAAACAAACCCCTAGCCAAACTAACTAAAAGTCAGAGAAAGAATATCCA
AATTAACAAAATCAGAAATGAAATGGGAGTTAAAACCACAGACATTGAGG
AAATTCAAAGAATCATTAGGTTTTACTTTGAAAACAAGTACTCCACAAAA
TTGGAAAATCTAAACAAAATGGACCATTTTCTTGATAGAAAGCACTTACT
AAAGTAAATGAAGATGAAGTAACAATTTAAACAGAGTTACTACCCCAGGG
AAAAAGGGAAAGTCATTAAAATCTTTTAACTATCAAAGCCTGGGGCCAGA
TGATTTTAGGGCAGAATTCTACCAGACATTCAAAAAAGAATTAAT

Query= MSMg01no540_b13.b1 MSMg01no540_b13.b1 CHROMAT_FILE:
MSMg01no540_b13.b1 PHD_FILE: MSMg01no540_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:16 2005
         (664 letters)



>mm_chr18_30161799_30162865
          Length = 1067

 Score = 1224 bits (633), Expect = 0.0
 Identities = 659/669 (98%), Gaps = 5/669 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagagctcagagctaatgatgtgaaggatacttatcctccagggtgatcatttctagagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 aagagctcagagctaatgatgtgaaggatacttatcctccagggtgatcatttctagagg 258

                                                                       
Query: 61  gactagtggggaaaagctcaaatgcttcccctgacaagcattgtcagaaaggaagaaagc 120
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 259 gactagtggggaaaagctcaaatgcttcccctgacaatcattgtcagaaaggaagaaagc 318

                                                                       
Query: 121 tcagttatgagttgaaaaaagggcttcctttaaatctgccttatggccacttgggatata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcagttatgagttgaaaaaagggcttcctttaaatctgccttatggccacttgggatata 378

                                                                       
Query: 181 actcgggtgctcaaaagccaagcagatagaagctttaagtggttctagtatatatatt-- 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 379 actcgggtgctcaaaagccaagcagatagaagctttaagtggttctagtatatatattaa 438

                                                                       
Query: 239 aaaaaaaattaaccatgatacatatcacctagtatcataactgacttctaatatgtcctt 298
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 439 aaaaaaaataaaccatgatacatatcacctagtatcataactgacttctaatatgccctt 498

                                                                       
Query: 299 tgcccacaaaaataatgcattaaattatataatatacataaagagttcagagcagtgcct 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tgcccacaaaaataatgcattaaattatataatatacataaagagttcagagcagtgcct 558

                                                                       
Query: 359 tggatgactccatggatattactacattctgcagagtacattttggtaagtcctcttgaa 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tggatgactccatggatattactacattctgcagagtacattttggtaagtcctcttgaa 618

                                                                       
Query: 419 acactgctcaaacaaattactctatcattgtcttttagaaaagtccccaactccttagag 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 acactgctcaaacaaattactctatcattgtcttttagaaaagtccccaactccttagag 678

                                                                       
Query: 479 ttgataccactgatgtcaacaaacactgtgtggagtctctttctaaaaaaggaggagttg 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttgataccactgatgtcaacaaacactgtgtggagtctctttctaaaaaaggaggagttg 738

                                                                       
Query: 539 aa--aaaaaaaaaaaac-acaaatgtctccaagctgctccaacccaaatagagtttcaca 595
           ||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 aagaaaaaaaaaaaaaccacaaatgtctccaagctgctccaacccaaatagagtttcaca 798

                                                                       
Query: 596 ggacagagatgttcttcatgcttgaagtgcattagcatcctacactccattctttgccat 655
            |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 799 agacagagatgttcttcatgcttgaagtgcattagaatcctacactccattctttgccat 858

                    
Query: 656 gcttttcta 664
           |||||||||
Sbjct: 859 gcttttcta 867


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1067
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1057
Effective search space:   691278
Effective search space used:   691278
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)