Query= MSMg01no541_i16.b1 MSMg01no541_i16.b1 CHROMAT_FILE:
MSMg01no541_i16.b1 PHD_FILE: MSMg01no541_i16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:14 2005
(677 letters)
>mm_chr18_4684206_4685282
Length = 1077
Score = 1224 bits (633), Expect = 0.0
Identities = 656/673 (97%), Gaps = 16/673 (2%)
Strand = Plus / Plus
Query: 5 gaattcatagggattcttagcctgtcagagaggccgagaagaagacataggaatttcagg 64
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 221 gaattcatagggatccttagcctgtcagagaggccgagaagaagaca--ggaatttcagg 278
Query: 65 tctaaactgggccacccccctcccaggactggagccctgctgttgttccctcaactaggg 124
|||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tcta--------------cctcccaggactggagccctgctgttgttccctcaactaggg 324
Query: 125 gggtcctttcactctcccaggccccccatgagatcgattttgcccatggtttctcttcag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggtcctttcactctcccaggccccccatgagatcgattttgcccatggtttctcttcag 384
Query: 185 acagaacagggtgtggacggtgtttacaagtctggctgcagcccacagcacagcaatcgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acagaacagggtgtggacggtgtttacaagtctggctgcagcccacagcacagcaatcgg 444
Query: 245 tggcctccatagagagcccctcctggatgtgaagtgtgaggtcctcacatgcttttacgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tggcctccatagagagcccctcctggatgtgaagtgtgaggtcctcacatgcttttacgt 504
Query: 305 gcagagatgctcccctcggacttcctaagtgaggcttgctccgaccccatgtgtggcttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcagagatgctcccctcggacttcctaagtgaggcttgctccgaccccatgtgtggcttc 564
Query: 365 tttcctgggtgttcagccagtagtctacaggctgtaaatgttgtagggctctggaggcag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttcctgggtgttcagccagtagtctacaggctgtaaatgttgtagggctctggaggcag 624
Query: 425 ctatcattgaggaacagtggtggtccagtagcccctggtttggtttcagtgggagagccc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctatcattgaggaacagtggtggtccagtagcccctggtttggtttcagtgggagagccc 684
Query: 485 agacactccatttgctgtttcttttcttcactttctatgttctgttcttcctttagtctt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agacactccatttgctgtttcttttcttcactttctatgttctgttcttcctttagtctt 744
Query: 545 ggctgctagcatttctacacagttcagccctactgaaacagtccaagcctaagatggcag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ggctgctagcatttctacacagttcagccctactgaaacagtccaagcctaagatggcag 804
Query: 605 gttcaatttctgcagagggatcctctgcctttatctacctagcacttggttggggtattt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gttcaatttctgcagagggatcctctgcctttatctacctagcacttggttggggtattt 864
Query: 665 aaaatcaaacata 677
|||||||||||||
Sbjct: 865 aaaatcaaacata 877
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no541_i16.g1 MSMg01no541_i16.g1 CHROMAT_FILE:
MSMg01no541_i16.g1 PHD_FILE: MSMg01no541_i16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:14 2005
(504 letters)
>mm_chr18_4855610_4856514
Length = 905
Score = 646 bits (334), Expect = 0.0
Identities = 346/350 (98%), Gaps = 1/350 (0%)
Strand = Plus / Minus
Query: 1 acagaatgcaaggcaaggacattgctaaccatgagaaagatgtgctcacaatgtacagac 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 350 acagaatgcaaggcaaggacattgttaaccatgagaaagatgtgctcacaatgtacagac 291
Query: 61 agaagttgtagaaagttagctgacaccacataaatcagactcctttgc-tttttttttgg 119
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 290 agaagttgtagaaagttagctgacaccacataaatcagactcctttgcttttttttttgg 231
Query: 120 caaaagactttaaaataggattttaatactcgtttctttctcccctgaggtcctagggat 179
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 230 caaaagactttaaaataggattttaatacttgtttctttctcccctgaggtcctagggat 171
Query: 180 caaatctgagcctcatgtgtgctaggcaagggctcaagccctagctaggtccccaggaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 caaatctgagcctcatgtgtgctaggcaagggctcaagccctagctaggtccccaggaac 111
Query: 240 ccctttttcttaagatttgttcttggtctaatttacccagactggccatgaacttgctct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 ccctttttcttaagatttgttcttggtctaatttacccagactggccatgaacttgctct 51
Query: 300 gtagtccagatcaactttgactttgtggtcctctggcctcagccttgcta 349
||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 gtagtccaggtcaactttgactttgtggtcctctggcctcagccttgcta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 905
Length adjustment: 10
Effective length of query: 494
Effective length of database: 895
Effective search space: 442130
Effective search space used: 442130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
