CAATAATTTGCGGTCGCTGTACTACTCACTATATTGAGAGGATCCGCGGA
ATTCTTTGTTTAGCTCTGAGCCCCATTTTTTAATGGGGTTATTCGATTTT
CTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCTT
ATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTT
TTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGCAGTTTCATA
AGGTCCCATTTGTCAATTCTCAATCTTACAGCACAAAAAATTCAGGAATT
TTTTCCCCTGTGCCCATATCTTCGAGGCTTTTCCCCACTTTCTCCTCTAT
AAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCCACTTAGATT
TCACCTTACTACAAGGAGATAGGAATGGATCAATTCGCATTCTTCTACAT
GATAACCACCAGTTGTGCCAGCACCATTTGTTGTAAATGCTGTCTTTCTT
GCACTGAATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGT
GTGGGTTCATTTCTGGGTCTTCAATTTTATTCCATTGGTCTACTTGTCTG
TCCCTATACCAGTACCATACAGTTTTTATCACAATTTTCCTGTAGTACAG
ATTTATGTCAGGCATGGTGATTCCACCGGAGGTTCTTTTATCCTTGAGAA
GAGTTTTTGCTTTCCTAGGTTTTTTGTTATTCCAGGTGAATTTGCAGATT
CCTCTTTCTAATTCCTT

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTATTTCTTTAGGCTTGACATTCCTT
GGACTTTTCACATGGAATGTTCTTGGGGAAAGCACAGATCCTGAGACAAC
CCTTAGCTCACAGGCTCCTGGTCTGCTGCAGTTTCTATCCCGAGCTTCCT
CTGGGTTCTTCTGTCAGGCACATACTACTCTAGTGTTTTAAGCTACAAAG
GGGATGCAGGGTCTGGTTCATGTTGCAGAGATTTCCAGCAGTATCCTGTG
ATCCCACTATTAGCTGAGCTCAGAAGGGTAACAGAGACCTGAAAGGCTCA
TTACCAATTACCAATTCCCTGGGCCATTCTGTTCCCTAGCAAAAAAAAAA
AAAAAAAAAAAAAACCAAACCAAAAACCGCTTCAGATGCGATGCATTTGC
TTTGCAAATTGGAAACATTCGGACAACTCCTACTTTACCTTCATGCTGCC
AAGGCAGGGTTTGACATGTGTGTGCTTCCACTTCAGGGATAACACTCAGG
GCTCCCTTCTGGTGCTACACTTGGTAATATTGTCATGAAGACACCACAGT
CTCAAAACCAGGAGAAGTGACATGAGATGTGGAGGTTCCCTGGGATTCTT
GCCTGTGTGTGGAAAGCTTCAGTAAAGCCTGAGATATAACTTTGAACAAG
ACCTAGTTGGCATATACATTCTTTTATTATCACATATATAATTTACCTTC
ACATTTCACAAGGCTATTTAATA

Query= MSMg01no543_b16.g1 MSMg01no543_b16.g1 CHROMAT_FILE:
MSMg01no543_b16.g1 PHD_FILE: MSMg01no543_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:21 2005
         (625 letters)



>mm_chr18_3601231_3602255
          Length = 1025

 Score = 1112 bits (575), Expect = 0.0
 Identities = 605/625 (96%), Gaps = 16/625 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatttctttaggcttgacattccttggacttttcacatggaatgttcttggggaaagcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatttctttaggcttgacattccttggacttttcacatggaatgttcttggggaaagcac 260

                                                                       
Query: 61  agatcctgagacaacccttagctcacaggctcctggtctgctgcagtttctatcccgagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatcctgagacaacccttagctcacaggctcctggtctgctgcagtttctatcccgagc 320

                                                                       
Query: 121 ttcctctgggttcttctgtcaggcacatactactctagtgttttaagctacaaaggggat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcctctgggttcttctgtcaggcacatactactctagtgttttaagctacaaaggggat 380

                                                                       
Query: 181 gcagggtctggttcatgttgcagagatttccagcagtatcctgtgatcccactattagct 240
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagggtctggttcatgttgcagagatttccagcagtatcctgtgatcccactattagct 440

                                                                       
Query: 241 gagctcagaagggtaacagagacctgaaaggctcattaccaattaccaattccctgggcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagctcagaagggtaacagagacctgaaaggctcattaccaattaccaattccctgggcc 500

                                                                       
Query: 301 attctgttccctagcaaaaaaaaaaaaaaaaaaaaaaaaccaaaccaaaaaccgcttcag 360
           |||||||||||||||||||||||||||||||||||                || ||||||
Sbjct: 501 attctgttccctagcaaaaaaaaaaaaaaaaaaaa----------------cctcttcag 544

                                                                       
Query: 361 atgcgatgcatttgctttgcaaattggaaacattcggacaactcctactttaccttcatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atgcgatgcatttgctttgcaaattggaaacattcggacaactcctactttaccttcatg 604

                                                                       
Query: 421 ctgccaaggcagggtttgacatgtgtgtgcttccacttcagggataacactcagggctcc 480
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ctgccatggcagggtttgacatgtgtgtgcttccacttcagggataacactcagggctcc 664

                                                                       
Query: 481 cttctggtgctacacttggtaatattgtcatgaagacaccacagtctcaaaaccaggaga 540
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 665 cttctggtgctacacttggtgatattgtcatgaagacaccacagtctcaaaaccaggaga 724

                                                                       
Query: 541 agtgacatgagatgtggaggttccctgggattcttgcctgtgtgtggaaagcttcagtaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 agtgacatgagatgtggaggttccctgggattcttgcctgtgtgtggaaagcttcagtaa 784

                                    
Query: 601 agcctgagatataactttgaacaag 625
           |||||||||||||||||||||||||
Sbjct: 785 agcctgagatataactttgaacaag 809


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)