Query= MSMg01no544_c16.b1 MSMg01no544_c16.b1 CHROMAT_FILE:
MSMg01no544_c16.b1 PHD_FILE: MSMg01no544_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:44 2005
(378 letters)
>mm_chr18_48162211_48162989
Length = 779
Score = 679 bits (351), Expect = 0.0
Identities = 372/379 (98%), Gaps = 1/379 (0%)
Strand = Plus / Plus
Query: 1 acctaatcaggcacacgtattgccttcagggtagctgcaagatattatcagaatttcttc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 acctaatcaggcacacgtattgccttcaggggagctgcaagatattatcagaatttcttc 260
Query: 61 cacaaatattccacttagaatttgggaaattcctatgtcaattaaaatgtaaaatgcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacaaatattccacttagaatttgggaaattcctatgtcaattaaaatgtaaaatgcttc 320
Query: 121 acttaactagaacttttaaacataaaactccacatttttatcatgaattcaaccaatatg 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttaactagaacttttaaacacaaaactccacatttttatcatgaattcaaccaatatg 380
Query: 181 ctctgtagtctgtaaatgatagacagattttaatgtctgaatttttaattttcattcttc 240
|||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 ctctgtagtctgtaaatgatggacagattttaatgtatgaatttttaattttcattcttc 440
Query: 241 taagaatgttagaaattaaatggtcagaaactctcttaagcttcttctcacagtgtctgt 300
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 441 taagaatgttagaaattaaatggtcagaaaatctcttaagcttcttctcactgtgtctgt 500
Query: 301 tcatgtctcatagtatttaatagtgtatggaaatgtgatctgaggacttttgatcaa-ta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 501 tcatgtctcatagtatttaatagtgtatggaaatgtgatctgaggacttttgatcaaata 560
Query: 360 tttaaacaatatattacag 378
|||||||||||||||||||
Sbjct: 561 tttaaacaatatattacag 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 779
Length adjustment: 9
Effective length of query: 369
Effective length of database: 770
Effective search space: 284130
Effective search space used: 284130
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_c16.g1 MSMg01no544_c16.g1 CHROMAT_FILE:
MSMg01no544_c16.g1 PHD_FILE: MSMg01no544_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:44 2005
(251 letters)
>mm_chr18_48324762_48325412
Length = 651
Score = 412 bits (213), Expect = e-119
Identities = 213/213 (100%)
Strand = Plus / Minus
Query: 1 actactactcaagacttgatcaaccctatcaacaatcataggtaggtaagaatactcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 actactactcaagacttgatcaaccctatcaacaatcataggtaggtaagaatactcata 352
Query: 61 agatactactggttactggtgtaatttcagctactgatagattccagagaaaagagagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 agatactactggttactggtgtaatttcagctactgatagattccagagaaaagagagtt 292
Query: 121 gtcttcagttatatgatgactgctaagtaccctagcctctggatagctccaaagccatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gtcttcagttatatgatgactgctaagtaccctagcctctggatagctccaaagccatag 232
Query: 181 taacacagacaatcctattgaactcactgagtc 213
|||||||||||||||||||||||||||||||||
Sbjct: 231 taacacagacaatcctattgaactcactgagtc 199
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
