XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAT
TCTCAGCAACCACAGGGTGGCTCACAACCATCTGTAATGGGATTAGATGC
CCTCTTCTGGTGAAGACAGCTACAGTATGCCCATATACATAAAATAAATA
AATCATTAAAAAGGAATATAGGTCTTAAAAAGAAAAGAAAAAGATTTAAA
ATGTTTATATTCATATTTGATAATTAACTTAGTATGTTAATATATATTCA
GTATAAAATTTTTTACAAGTCTACTTACTCAGTTTGCTTTGGACACAGGG
TCTTACTGTGTAGCCCTAGATAGCCTGGAACTCTGGTGACGAGGCTGGCC
TCAAAGTCACAGAGGTGCACCTGCCTGCACCTCCTGAGTGCTTAGATTAA
AGGTGTGCACCACCATGCCCAGACTTAGTTACACTTTCACAGTAAATCTT
TTTATAGGATATCACTTTTTTAAAGGATAAATTAGTATTTAGAGCAAATC
CAAACCTGGCCAACAGTTATTGACTTCTTCATTGCTATGTGTGGCCAACA
GGAATAGAACATCCCATGTCTAGAAGGCACTGTGGGCTTCAATGGTGTGA
GCCAAGAGGCCTGAAAGTGGGGGAAGGGGCCTACGCCTGAGCTTAAGTCA
TGATCATTCGGGGTTTGAGGCAAGCAGATAGGCTTGACTTCAGGGCCAGC
CTGGGCTACAAGAGGAAACACTGTT

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTGGTTTCTTCGAAAAACACAGAACTATCAT
AAGAATCTGTTCATATGTTTTTGTTTTAATCCCAGGGGTGGGGGGTGGGG
AAGATGACTATGATTTGCCTTGTGCTCTAGCAGGGGTGTGATTTTTCCAG
CAGCTGATAGTATCTGTGATTGTATGAAATTTGGAATTCTGTGGACTTTT
CAGAGAGTATATAACTGCTATGACCCCAGCAGAGGTGGGTTGGTGGTTGG
TTGCTGTTGCTCGTATTTTGTTAAGTAGTCATGGGCAAAGAAGAAACAAT
ATAATAAGAATTTAGATTCCTGATTGTTAATTACATACTTATGCCAAGAA
ACTTGTCACCCCAATCTGTATTAAGTGGTCTAAGGAACATTGCCCCTTCC
CTTTCTATCCTTGTTTCTCTCCTATCTTTTGTTTTATGCTGATTGTGTGT
ATTAAGGTGGAAGGGAAATTTATCCTTTTTGTGCTCTATTATCTTTTTTC
TGTTTGTTTCTTTTAGTTATTTTTAAATTTTGTTTTCGTATTTTTTCACT
TTTTTCCTCTAATCTTGTTCTTTTTTATATAATTTTAATGATTTTTTATG
TATATACCTTATTTATTTTTTCTATTCTCTTTATTTTTATTTTTTTCCCT
TTTTCTTTTTTTTTTCTATCTCCTTTGTTCTTCTCCTTTACTGG

Query= MSMg01no545_e19.b1 MSMg01no545_e19.b1 CHROMAT_FILE:
MSMg01no545_e19.b1 PHD_FILE: MSMg01no545_e19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:14 2005
         (599 letters)



>mm_chr18_12138291_12139289
          Length = 999

 Score = 1098 bits (568), Expect = 0.0
 Identities = 589/596 (98%), Gaps = 2/596 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaattctcagcaaccacagggtggctcacaaccatctgtaatgggattagatgcc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 205 gaattcaattctcagcaaccacagggtggctcacaaccatctgtaatgggattggatgcc 264

                                                                       
Query: 65  ctcttctggtgaagacagctacagtatgcccatatacataaaataaataaatcattaaaa 124
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 ctcttctggtgaagacagctacagtgtgcccatatacataaaataaataaatcattaaaa 324

                                                                       
Query: 125 aggaatataggtctt-aaaaagaaaagaaaaagatttaaaatgtttatattcatatttga 183
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggaatataggtcttaaaaaagaaaagaaaaagatttaaaatgtttatattcatatttga 384

                                                                       
Query: 184 taattaacttagtatgttaatatatattcagtataaaattttttacaagtctacttactc 243
           |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 385 taattaacttagtatgttaatatatattcagtataaaa-tttttacaagtctagttactc 443

                                                                       
Query: 244 agtttgctttggacacagggtcttactgtgtagccctagatagcctggaactctggtgac 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agtttgctttggacacagggtcttactgtgtagccctagatagcctggaactctggtgac 503

                                                                       
Query: 304 gaggctggcctcaaagtcacagaggtgcacctgcctgcacctcctgagtgcttagattaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaggctggcctcaaagtcacagaggtgcacctgcctgcacctcctgagtgcttagattaa 563

                                                                       
Query: 364 aggtgtgcaccaccatgcccagacttagttacactttcacagtaaatctttttataggat 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aggtgtgcaccaccatgcccagacttagttacactttcacagtaaatctttttataggat 623

                                                                       
Query: 424 atcacttttttaaaggataaattagtatttagagcaaatccaaacctggccaacagttat 483
            ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtcacttttttacaggataaattagtatttagagcaaatccaaacctggccaacagttat 683

                                                                       
Query: 484 tgacttcttcattgctatgtgtggccaacaggaatagaacatcccatgtctagaaggcac 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgacttcttcattgctatgtgtggccaacaggaatagaacatcccatgtctagaaggcac 743

                                                                   
Query: 544 tgtgggcttcaatggtgtgagccaagaggcctgaaagtgggggaaggggcctacgc 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tgtgggcttcaatggtgtgagccaagaggcctgaaagtgggggaaggggcctacgc 799


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space:   582521
Effective search space used:   582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)