Query= MSMg01no546_k09.b1 MSMg01no546_k09.b1 CHROMAT_FILE:
MSMg01no546_k09.b1 PHD_FILE: MSMg01no546_k09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:00 2005
(376 letters)
>mm_chr18_10959024_10959799
Length = 776
Score = 698 bits (361), Expect = 0.0
Identities = 370/373 (99%)
Strand = Plus / Plus
Query: 4 ggaattccttccccttttgggtcagctgtcctaggttcgaatctcagtttcacctcttcc 63
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttcccccattgggtcagctgtcctaggttcgaatctcagtttcacctcttcc 263
Query: 64 ttgtggctttagacaaataacattggttttcagtgctttgttttcctatctatgaagtat 123
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 264 ttgtggctttagacaaataacattggttttcagtgctttgtttccctatctatgaagtat 323
Query: 124 ggacagtaacaatgctttccttgtgggagtaacttcagtttgtgtgttcatggtatcaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggacagtaacaatgctttccttgtgggagtaacttcagtttgtgtgttcatggtatcaga 383
Query: 184 actctatccctgaaagacaagtggttgaaaagattatgagtggaagtggttatatgttgg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 actctatccctgaaagacaagtggttgaaaagattatgagtggaagtggttatatgttgg 443
Query: 244 tttttcatatattgacttgatcaaactacaatcaacacgaaactccgtcaaggaatagga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttttcatatattgacttgatcaaactacaatcaacacgaaactccgtcaaggaatagga 503
Query: 304 tctttatgataaaatttttatgacaggagtcccaatcctttagatagtaataagtattgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tctttatgataaaatttttatgacaggagtcccaatcctttagatagtaataagtattgt 563
Query: 364 cagatgtctatcg 376
|||||||||||||
Sbjct: 564 cagatgtctatcg 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no546_k09.g1 MSMg01no546_k09.g1 CHROMAT_FILE:
MSMg01no546_k09.g1 PHD_FILE: MSMg01no546_k09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:00 2005
(419 letters)
>mm_chr18_11105712_11106530
Length = 819
Score = 758 bits (392), Expect = 0.0
Identities = 413/420 (98%), Gaps = 2/420 (0%)
Strand = Plus / Minus
Query: 1 actgg-cagtatcagcacagctctccagtactttctagagccactgtggctccctacaaa 59
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 actggcca-tatcagcacagctctccagtactttctagagccactgtggctccctacaaa 466
Query: 60 catctagaagcactgtccccctgcccccactcatcaggaactcctcacacactctgagaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 catctagaagcactgtccccctgcccccactcatcaggaactcctcacacactctgagaa 406
Query: 120 gcttcacatattgtctggtggatgttttcagctatgtgggcctcctgcttcctaggtgtg 179
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gcttcacatattgtctgatggatgttttcagctatgtgggcctcctgcttcctaggtgtg 346
Query: 180 tttcattagaatggctgaagctgcagttccccagcttcatatattggttatttcagaaat 239
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tttcattagaatggttgaagctgcagttccccagcttcatatattggttatttcagaaat 286
Query: 240 gccatcatctcatgagattttaacagtccaagaatgatacctacaggccttaggtgtcat 299
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 285 gccatcatctcatgagattttaacagtccaagaaggatacctacaggccttaggtatcat 226
Query: 300 tagttatattagttaggtatcttagttaaggtttctactgctgtgataaaacaccatgaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tagttatattagttaggtatcttagttaaggtttctactgctgtgataaaacaccatgaa 166
Query: 360 ttgaggagaaaagggtttccactcaacttacacttccaggtaaaagtcaatcactgaaaa 419
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 165 ttgaggagaaaagggtttccgctcaacttacacttccaggtaaaagtcaatcactgaaaa 106
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
